Basic Information | |
---|---|
Species | Cucumis sativus |
Cazyme ID | Cucsa.288760.1 |
Family | CE8 |
Protein Properties | Length: 398 Molecular Weight: 44144.1 Isoelectric Point: 9.7811 |
Chromosome | Chromosome/Scaffold: 02698 Start: 288346 End: 290382 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
---|
NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CE8 | 90 | 336 | 0 |
VAKNPASGDFTSIQDAIDSLPFINLVRVVIKVHAGVYTEKVNIPPLKSFITIEGAGAEKTIIQWGDTAQTPGSNGQPMGTYNSATFAVNSPYFIAKNITF KNTTPVPAPGAIGKQAVAFRISADTAAFFGCRFLGAQDTLYDHLGRHYYKDCYIEGSVDFIFGNGLSLFEGCHVHAIAQYTGALTAQGRSSLLEDTGFSF VKCKVTGSGALYLGRAWGPFSRVVFAYTYMDNIIIPKGWYNWGDPNR |
Full Sequence |
---|
Protein Sequence Length: 398 Download |
MSKLHPHPSL LLLLLLLLFL LLSLSFTQTH CHTKGLKPKK SSKNFLPNNS TKTQFSEQQF 60 LKWVKFVGSL RHSVFKTAKN KLFPSFTLHV AKNPASGDFT SIQDAIDSLP FINLVRVVIK 120 VHAGVYTEKV NIPPLKSFIT IEGAGAEKTI IQWGDTAQTP GSNGQPMGTY NSATFAVNSP 180 YFIAKNITFK NTTPVPAPGA IGKQAVAFRI SADTAAFFGC RFLGAQDTLY DHLGRHYYKD 240 CYIEGSVDFI FGNGLSLFEG CHVHAIAQYT GALTAQGRSS LLEDTGFSFV KCKVTGSGAL 300 YLGRAWGPFS RVVFAYTYMD NIIIPKGWYN WGDPNREMYL IFSLLIPLSF FLSFVLSLLT 360 LSFFGYKFQI SKQSEETLSF CSSYVECTKT KKANFFL* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02432 | PLN02432 | 1.0e-90 | 97 | 337 | 241 | + putative pectinesterase | ||
PLN02773 | PLN02773 | 9.0e-91 | 88 | 337 | 257 | + pectinesterase | ||
PLN02665 | PLN02665 | 1.0e-91 | 87 | 337 | 253 | + pectinesterase family protein | ||
PLN02634 | PLN02634 | 3.0e-100 | 96 | 331 | 236 | + probable pectinesterase | ||
PLN02682 | PLN02682 | 0 | 38 | 338 | 301 | + pectinesterase family protein |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN63186.1 | 0 | 14 | 342 | 10 | 335 | hypothetical protein [Vitis vinifera] |
EMBL | CBI27989.1 | 0 | 74 | 342 | 1 | 269 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_197474.1 | 0 | 27 | 342 | 24 | 339 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002330522.1 | 0 | 16 | 342 | 11 | 337 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002514210.1 | 0 | 1 | 342 | 1 | 339 | Pectinesterase PPE8B precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 1.4013e-45 | 90 | 331 | 10 | 252 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 1e-35 | 90 | 333 | 6 | 251 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3uw0_A | 3e-24 | 90 | 328 | 35 | 303 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_B | 4e-17 | 90 | 328 | 8 | 279 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_A | 4e-17 | 90 | 328 | 8 | 279 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |