y
Basic Information | |
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Species | Cucumis sativus |
Cazyme ID | Cucsa.299790.2 |
Family | AA7 |
Protein Properties | Length: 359 Molecular Weight: 38357 Isoelectric Point: 4.4949 |
Chromosome | Chromosome/Scaffold: 02920 Start: 248149 End: 252098 |
Description | cytokinin oxidase 7 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA7 | 56 | 247 | 6.2e-32 |
VAPLALVTPAGADDVAKVVKSAVQSSNLTVAARGNGHSINGQAMTDGGLVLDMRAMEDNLRVVTINEFCYADVSGGALWEDVLKRCVSSYGLAPRSWTDY LSLTVGGTLSNAGVSGQAFRYGPQISNVAELEVVTGKGDTLICSENENSELFFSVLGGLGQFGIITRARVLLQPAPDMVRWIRLVYDEFERF |
Full Sequence |
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Protein Sequence Length: 359 Download |
MMIAYLEPFL QDTDSRRPHD GSALCEALQI QLQGGVSTDS RDIGLAGKDF GGLHSVAPLA 60 LVTPAGADDV AKVVKSAVQS SNLTVAARGN GHSINGQAMT DGGLVLDMRA MEDNLRVVTI 120 NEFCYADVSG GALWEDVLKR CVSSYGLAPR SWTDYLSLTV GGTLSNAGVS GQAFRYGPQI 180 SNVAELEVVT GKGDTLICSE NENSELFFSV LGGLGQFGII TRARVLLQPA PDMVRWIRLV 240 YDEFERFAHD AESLIRRPEG DSFDYVEGFV FSNNDDPLTG RPTVPLDSNT IFNSSYLPET 300 AGSVLYCLEV AVHYRNNDQV STVDTVGFTN ISSVTRRGSV VLSGIVTIHS SKPGTCVG* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
TIGR00387 | glcD | 1.0e-6 | 82 | 245 | 175 | + glycolate oxidase, subunit GlcD. This protein, the glycolate oxidase GlcD subunit, is similar in sequence to that of several D-lactate dehydrogenases, including that of E. coli. The glycolate oxidase has been found to have some D-lactate dehydrogenase activity [Energy metabolism, Other]. | ||
pfam01565 | FAD_binding_4 | 1.0e-20 | 58 | 199 | 143 | + FAD binding domain. This family consists of various enzymes that use FAD as a co-factor, most of the enzymes are similar to oxygen oxidoreductase. One of the enzymes Vanillyl-alcohol oxidase (VAO) has a solved structure, the alignment includes the FAD binding site, called the PP-loop, between residues 99-110. The FAD molecule is covalently bound in the known structure, however the residue that links to the FAD is not in the alignment. VAO catalyzes the oxidation of a wide variety of substrates, ranging form aromatic amines to 4-alkylphenols. Other members of this family include D-lactate dehydrogenase, this enzyme catalyzes the conversion of D-lactate to pyruvate using FAD as a co-factor; mitomycin radical oxidase, this enzyme oxidises the reduced form of mitomycins and is involved in mitomycin resistance. This family includes MurB an UDP-N-acetylenolpyruvoylglucosamine reductase enzyme EC:1.1.1.158. This enzyme is involved in the biosynthesis of peptidoglycan. | ||
COG0277 | GlcD | 3.0e-21 | 33 | 262 | 237 | + FAD/FMN-containing dehydrogenases [Energy production and conversion] | ||
pfam09265 | Cytokin-bind | 4.0e-25 | 231 | 324 | 94 | + Cytokinin dehydrogenase 1, FAD and cytokinin binding. Members of this family adopt an alpha+beta sandwich structure with an antiparallel beta-sheet, in a ferredoxin-like fold. They are predominantly found in plant cytokinin dehydrogenase 1, where they are capable of binding both FAD and cytokinin substrates. The substrate displays a 'plug-into-socket' binding mode that seals the catalytic site and precisely positions the carbon atom undergoing oxidation in close contact with the reactive locus of the flavin. | ||
PLN02441 | PLN02441 | 1.0e-154 | 1 | 326 | 332 | + cytokinin dehydrogenase |
Gene Ontology | |
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GO Term | Description |
GO:0008762 | UDP-N-acetylmuramate dehydrogenase activity |
GO:0009690 | cytokinin metabolic process |
GO:0016491 | oxidoreductase activity |
GO:0019139 | cytokinin dehydrogenase activity |
GO:0050660 | flavin adenine dinucleotide binding |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK32520.1 | 0 | 2 | 325 | 1 | 317 | cytokinin oxidase/dehydrogenase 1 [Pisum sativum] |
RefSeq | NP_850863.1 | 0 | 2 | 324 | 1 | 332 | CKX7 (CYTOKININ OXIDASE 7); cytokinin dehydrogenase/ oxidoreductase [Arabidopsis thaliana] |
RefSeq | XP_002279960.1 | 0 | 2 | 324 | 1 | 322 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002309468.1 | 0 | 2 | 324 | 1 | 327 | cytokinin oxidase [Populus trichocarpa] |
RefSeq | XP_002516133.1 | 0 | 2 | 325 | 1 | 327 | gulonolactone oxidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2q4w_A | 0 | 3 | 324 | 2 | 332 | A Chain A, Glu381ser Mutant Of Maize Cytokinin OxidaseDEHYDROGENASE COMPLEXED With N6-Isopentenyladenosine |
PDB | 2exr_A | 0 | 3 | 324 | 2 | 332 | A Chain A, X-Ray Structure Of Cytokinin OxidaseDEHYDROGENASE (CKX) FROM Arabidopsis Thaliana At5g21482 |
PDB | 3kjm_A | 0 | 8 | 316 | 6 | 320 | A Chain A, X-Ray Structure Of Cytokinin OxidaseDEHYDROGENASE (CKX) FROM Arabidopsis Thaliana At5g21482 |
PDB | 2qpm_A | 0 | 8 | 316 | 6 | 320 | A Chain A, Leu492ala Mutant Of Maize Cytokinin OxidaseDEHYDROGENASE COMPLEXED With Benzylurea Inhibitor Cpbu |
PDB | 3s1e_A | 0 | 8 | 316 | 6 | 320 | A Chain A, Pro427gln Mutant Of Maize Cytokinin OxidaseDEHYDROGENASE COMPLEXED With N6-Isopentenyladenine |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FC070877 | 288 | 37 | 324 | 0 |
HO781924 | 324 | 2 | 324 | 0 |
GR446435 | 278 | 47 | 323 | 0 |
EG505655 | 307 | 24 | 323 | 0 |
CO088650 | 264 | 44 | 306 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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