Basic Information | |
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Species | Cucumis sativus |
Cazyme ID | Cucsa.300590.1 |
Family | CE8 |
Protein Properties | Length: 307 Molecular Weight: 33824.4 Isoelectric Point: 7.1226 |
Chromosome | Chromosome/Scaffold: 02931 Start: 124061 End: 125888 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 4 | 292 | 0 |
IVVDKLGKGNFTTIQSAINSVPSQSTKWIRIQISPGIYTEKVTIPSEKSCIFLDGSGLQVTEIHWNDHETTAASPTFTASAQNLVVQGITFRNTYNARGS VMRREDIKPALAALIQGDKVIFHKCGFIGLQDTLWDGPGRHLFTQCYIEGVIDVISGFGQSIYKECVINIPVNAYAPLLNEGFITAQGKENPNESSGFVF LRCIVQGSGNVFLGRAYRPFSTVIFHLCFLPSCINPAGWNSWLQAGHESDLTYSETRCIGPGADTSSRVPWVNRLDAFHIRSFTDISYI |
Full Sequence |
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Protein Sequence Length: 307 Download |
AYTIVVDKLG KGNFTTIQSA INSVPSQSTK WIRIQISPGI YTEKVTIPSE KSCIFLDGSG 60 LQVTEIHWND HETTAASPTF TASAQNLVVQ GITFRNTYNA RGSVMRREDI KPALAALIQG 120 DKVIFHKCGF IGLQDTLWDG PGRHLFTQCY IEGVIDVISG FGQSIYKECV INIPVNAYAP 180 LLNEGFITAQ GKENPNESSG FVFLRCIVQG SGNVFLGRAY RPFSTVIFHL CFLPSCINPA 240 GWNSWLQAGH ESDLTYSETR CIGPGADTSS RVPWVNRLDA FHIRSFTDIS YIDPQGYWTS 300 RIPLLS* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02432 | PLN02432 | 6.0e-67 | 1 | 297 | 297 | + putative pectinesterase | ||
PLN02682 | PLN02682 | 3.0e-69 | 1 | 293 | 309 | + pectinesterase family protein | ||
PLN02480 | PLN02480 | 2.0e-70 | 3 | 295 | 294 | + Probable pectinesterase | ||
PLN02176 | PLN02176 | 1.0e-96 | 1 | 304 | 304 | + putative pectinesterase | ||
PLN02497 | PLN02497 | 9.0e-108 | 1 | 304 | 304 | + probable pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002330032.1 | 0 | 1 | 304 | 36 | 324 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002515255.1 | 0 | 1 | 303 | 39 | 335 | Pectinesterase-2 precursor, putative [Ricinus communis] |
RefSeq | XP_002515259.1 | 0 | 1 | 303 | 361 | 660 | pectinesterase, putative [Ricinus communis] |
RefSeq | XP_002515259.1 | 0 | 1 | 305 | 35 | 341 | pectinesterase, putative [Ricinus communis] |
RefSeq | XP_002529267.1 | 0 | 1 | 305 | 37 | 339 | Pectinesterase-2 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 2e-32 | 4 | 274 | 9 | 281 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 1e-30 | 5 | 274 | 6 | 277 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 0.000000000000004 | 2 | 225 | 4 | 250 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 0.000000000000004 | 2 | 225 | 4 | 250 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 0.000000000000004 | 2 | 225 | 4 | 250 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DV984237 | 285 | 13 | 293 | 0 |
EE476551 | 224 | 1 | 223 | 0 |
EX317112 | 269 | 29 | 293 | 0 |
EX315894 | 270 | 28 | 293 | 0 |
AW036464 | 214 | 64 | 274 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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