| Basic Information | |
|---|---|
| Species | Cucumis sativus |
| Cazyme ID | Cucsa.301820.1 |
| Family | CE8 |
| Protein Properties | Length: 339 Molecular Weight: 37537.4 Isoelectric Point: 8.7585 |
| Chromosome | Chromosome/Scaffold: 02951 Start: 78520 End: 82964 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 41 | 328 | 0 |
| KGGSDVFLSVQAAVDSVPDYNTVNTIIRISPGYYVEKVVVPATKPYITFEGGGKETTVIEWHDRAGDRGPSGQQLRTYRTASVTVFANYFSARNISFKNT APAPLPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCELHSIATRFGSIAAQDRNSPIEKTGFAFLRC KVTGSGPVYVGRAMGQYSRIVYAYTYFDDVVAHGGWDDWDHVSNKNKTVFFGVYKCWGPGASKVKGVSWAKELEYKEAHPFLAKSFVN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 339 Download |
| MAFLFLHSFF FSTFFLLCFS AAANHHWIGP TGHRLIKVNV KGGSDVFLSV QAAVDSVPDY 60 NTVNTIIRIS PGYYVEKVVV PATKPYITFE GGGKETTVIE WHDRAGDRGP SGQQLRTYRT 120 ASVTVFANYF SARNISFKNT APAPLPGMQG WQAAAFRISG DKAYFSGCGF YGAQDTLCDD 180 AGRHYFKECY IEGSIDFIFG NGRSMYKDCE LHSIATRFGS IAAQDRNSPI EKTGFAFLRC 240 KVTGSGPVYV GRAMGQYSRI VYAYTYFDDV VAHGGWDDWD HVSNKNKTVF FGVYKCWGPG 300 ASKVKGVSWA KELEYKEAHP FLAKSFVNGR HWIAPSDA* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02304 | PLN02304 | 3.0e-103 | 47 | 338 | 300 | + probable pectinesterase | ||
| PLN02665 | PLN02665 | 3.0e-103 | 34 | 335 | 304 | + pectinesterase family protein | ||
| PLN02671 | PLN02671 | 2.0e-111 | 32 | 333 | 304 | + pectinesterase | ||
| PLN02682 | PLN02682 | 1.0e-137 | 34 | 335 | 302 | + pectinesterase family protein | ||
| PLN02634 | PLN02634 | 0 | 25 | 338 | 314 | + probable pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABD64977.1 | 0 | 4 | 338 | 13 | 360 | pectinesterase family protein [Brassica oleracea] |
| GenBank | ABD65006.1 | 0 | 20 | 338 | 23 | 344 | pectinesterase family protein [Brassica oleracea] |
| EMBL | CBI31927.1 | 0 | 20 | 338 | 32 | 349 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002266321.1 | 0 | 20 | 338 | 39 | 356 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002303355.1 | 0 | 24 | 335 | 4 | 314 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 2e-38 | 43 | 333 | 15 | 308 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 1e-30 | 38 | 333 | 6 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 3uw0_A | 7e-18 | 45 | 287 | 42 | 311 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2ntq_B | 0.00000000000003 | 41 | 213 | 10 | 192 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2ntq_A | 0.00000000000003 | 41 | 213 | 10 | 192 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
