| Basic Information | |
|---|---|
| Species | Cucumis sativus |
| Cazyme ID | Cucsa.307940.11 |
| Family | GH2 |
| Protein Properties | Length: 1115 Molecular Weight: 125866 Isoelectric Point: 6.1308 |
| Chromosome | Chromosome/Scaffold: 02978 Start: 221828 End: 230918 |
| Description | glycoside hydrolase family 2 protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH2 | 87 | 980 | 0 |
| IKSLSGYWKFYLAATPTSVPHNFHATVFEDSQWANLPVPSNWQMHGFDRPIYTNVVYPFPLDPPHVPEDNPTGCYRTYFHLPEEWKGRRILLHFEAVDSA FFAWINGSLVGYSQDSRLPAEFEITEYCHPCGSQSKNVLAVQVLKWSDGSYLEDQDQWWLSGIHRDVILLSKPQVFIGDYFFKSHVGEDFSYADIQVEVK IDSSLEGRKENFLNNFKLEAVLFDSGSWDNHDGNIDLLSSNMANVKLSLLSVTTLGFHGYVLGGRLQKPKLWSAEQPHLYTLIVLLKDSSDQIVDCESCL VGIRSITKGPKQLLVNGRPVVIRGVNRHEHHPRLGKTNIEACMVRDLVLMKQHNINAVRNSHYPQHSRWYELCDLFGMYMVDEANIETHGFDFSGHVKHP TLQPSWAAAMLDRVIGMVERDKNHACIIVWSLGNESGYGPNHSALAGWIRGKDSSRVLHYEGGGSRTSSTDIICPMYMRVWDIVNIANDPNETRPLILCE YSHSMGNSTGNLHKYWEAIDNTFGLQGGFIWDWVDQALLKEVGNGRKRWAYGGEFGDIPNDSTFCLNGVTWPDRTPHPALHEVKYLHQAIKISSKDGTLE VLNGHFFSTTEDLEFSWSIYGDGLELGNGILSLPVIGPRGSYNIEWQSSPWYDLWASSSALEFFLTISVKLLHSTRWAEAGHIVSLSQVQLPMKREFFPH SIKNGSSTLVNEILGDSVRVYQQNLWEIKLDVQTGTLESWKVKGVPLIIKGIIPSFWRAPTENDKGGGSCSYLSVWKAAHIDNLSFTAERCSILSTTEHY VKIAVIFLGVRSDDRQASNSDLEKSNVLIQADMTYTIFGSGDVLVNCNVQPSPNLPPLPRVGVKFHLDKSMDRVKWYGRGPFECYPDRKAAAHV | |||
| Full Sequence |
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| Protein Sequence Length: 1115 Download |
| MAALASKLLM PSDNGYRVWE DQTFIKWRKR DSHVPLRCQD SVEGCLKYWQ DRTKVDLLVS 60 NSAVWNDDAV QSALDSAAFW VKDLPFIKSL SGYWKFYLAA TPTSVPHNFH ATVFEDSQWA 120 NLPVPSNWQM HGFDRPIYTN VVYPFPLDPP HVPEDNPTGC YRTYFHLPEE WKGRRILLHF 180 EAVDSAFFAW INGSLVGYSQ DSRLPAEFEI TEYCHPCGSQ SKNVLAVQVL KWSDGSYLED 240 QDQWWLSGIH RDVILLSKPQ VFIGDYFFKS HVGEDFSYAD IQVEVKIDSS LEGRKENFLN 300 NFKLEAVLFD SGSWDNHDGN IDLLSSNMAN VKLSLLSVTT LGFHGYVLGG RLQKPKLWSA 360 EQPHLYTLIV LLKDSSDQIV DCESCLVGIR SITKGPKQLL VNGRPVVIRG VNRHEHHPRL 420 GKTNIEACMV RDLVLMKQHN INAVRNSHYP QHSRWYELCD LFGMYMVDEA NIETHGFDFS 480 GHVKHPTLQP SWAAAMLDRV IGMVERDKNH ACIIVWSLGN ESGYGPNHSA LAGWIRGKDS 540 SRVLHYEGGG SRTSSTDIIC PMYMRVWDIV NIANDPNETR PLILCEYSHS MGNSTGNLHK 600 YWEAIDNTFG LQGGFIWDWV DQALLKEVGN GRKRWAYGGE FGDIPNDSTF CLNGVTWPDR 660 TPHPALHEVK YLHQAIKISS KDGTLEVLNG HFFSTTEDLE FSWSIYGDGL ELGNGILSLP 720 VIGPRGSYNI EWQSSPWYDL WASSSALEFF LTISVKLLHS TRWAEAGHIV SLSQVQLPMK 780 REFFPHSIKN GSSTLVNEIL GDSVRVYQQN LWEIKLDVQT GTLESWKVKG VPLIIKGIIP 840 SFWRAPTEND KGGGSCSYLS VWKAAHIDNL SFTAERCSIL STTEHYVKIA VIFLGVRSDD 900 RQASNSDLEK SNVLIQADMT YTIFGSGDVL VNCNVQPSPN LPPLPRVGVK FHLDKSMDRV 960 KWYGRGPFEC YPDRKAAAHV GVYEKNVSEM HVPYIVPGES SGRTDVRWVT FENKDGVGIY 1020 ASIYGSSPPM QMRASYYSTA ELERAVHNDD LVEGDDIEVN LDHKHMGVGG DDSWSPCVHE 1080 EYLLPPVPYS FSIRFCPVTP STSGYDAYRS QLLL* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| smart01038 | Bgal_small_N | 1.0e-94 | 812 | 1095 | 286 | + Beta galactosidase small chain. This domain comprises the small chain of dimeric beta-galactosidases EC:3.2.1.23. This domain is also found in single chain beta-galactosidase. | ||
| pfam02836 | Glyco_hydro_2_C | 3.0e-107 | 396 | 678 | 293 | + Glycosyl hydrolases family 2, TIM barrel domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities. | ||
| COG3250 | LacZ | 1.0e-159 | 87 | 978 | 900 | + Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism] | ||
| PRK09525 | lacZ | 0 | 17 | 1097 | 1123 | + beta-D-galactosidase; Reviewed | ||
| PRK10340 | ebgA | 0 | 88 | 1098 | 1026 | + cryptic beta-D-galactosidase subunit alpha; Reviewed | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0004565 | beta-galactosidase activity |
| GO:0005975 | carbohydrate metabolic process |
| GO:0009341 | beta-galactosidase complex |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002266400.1 | 0 | 1 | 1112 | 1 | 1112 | PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
| RefSeq | XP_002266434.1 | 0 | 1 | 1112 | 1 | 1113 | PREDICTED: hypothetical protein isoform 2 [Vitis vinifera] |
| RefSeq | XP_002299206.1 | 0 | 1 | 1112 | 1 | 1108 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002303929.1 | 0 | 1 | 1113 | 1 | 1112 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002513059.1 | 0 | 1 | 1111 | 1 | 1107 | beta-galactosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3muy_4 | 0 | 87 | 1096 | 51 | 1021 | 1 Chain 1, E. Coli (Lacz) Beta-Galactosidase (R599a) |
| PDB | 3muy_3 | 0 | 87 | 1096 | 51 | 1021 | 1 Chain 1, E. Coli (Lacz) Beta-Galactosidase (R599a) |
| PDB | 3muy_2 | 0 | 87 | 1096 | 51 | 1021 | 1 Chain 1, E. Coli (Lacz) Beta-Galactosidase (R599a) |
| PDB | 3muy_1 | 0 | 87 | 1096 | 51 | 1021 | 1 Chain 1, E. Coli (Lacz) Beta-Galactosidase (R599a) |
| PDB | 1jz7_D | 0 | 87 | 1096 | 51 | 1021 | A Chain A, E. Coli (Lacz) Beta-Galactosidase In Complex With Galactose |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO804274 | 390 | 129 | 515 | 0 |
| ES794486 | 405 | 451 | 855 | 0 |
| EL444301 | 298 | 438 | 735 | 0 |
| EG397069 | 272 | 401 | 672 | 0 |
| HO804274 | 50 | 501 | 549 | 0.0000000008 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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