| Basic Information | |
|---|---|
| Species | Cucumis sativus |
| Cazyme ID | Cucsa.307940.12 |
| Family | GH2 |
| Protein Properties | Length: 1113 Molecular Weight: 125611 Isoelectric Point: 6.0871 |
| Chromosome | Chromosome/Scaffold: 02978 Start: 221828 End: 230967 |
| Description | glycoside hydrolase family 2 protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH2 | 87 | 978 | 0 |
| IKSLSGYWKFYLAATPTSVPHNFHATVFEDSQWANLPVPSNWQMHGFDRPIYTNVVYPFPLDPPHVPEDNPTGCYRTYFHLPEEWKGRRILLHFEAVDSA FFAWINGSLVGYSQDSRLPAEFEITEYCHPCGSQSKNVLAVQVLKWSDGSYLEDQDQWWLSGIHRDVILLSKPQVFIGDYFFKSHVGEDFSYADIQVEVK IDSSLEGRKENFLNNFKLEAVLFDSGSWDNHDGNIDLLSSNMANVKLSLLSVTTLGFHGYVLGGRLQKPKLWSAEQPHLYTLIVLLKDSSDQIVDCESCL VGIRSITKGPKQLLVNGRPVVIRGVNRHEHHPRLGKTNIEACMDLVLMKQHNINAVRNSHYPQHSRWYELCDLFGMYMVDEANIETHGFDFSGHVKHPTL QPSWAAAMLDRVIGMVERDKNHACIIVWSLGNESGYGPNHSALAGWIRGKDSSRVLHYEGGGSRTSSTDIICPMYMRVWDIVNIANDPNETRPLILCEYS HSMGNSTGNLHKYWEAIDNTFGLQGGFIWDWVDQALLKEVGNGRKRWAYGGEFGDIPNDSTFCLNGVTWPDRTPHPALHEVKYLHQAIKISSKDGTLEVL NGHFFSTTEDLEFSWSIYGDGLELGNGILSLPVIGPRGSYNIEWQSSPWYDLWASSSALEFFLTISVKLLHSTRWAEAGHIVSLSQVQLPMKREFFPHSI KNGSSTLVNEILGDSVRVYQQNLWEIKLDVQTGTLESWKVKGVPLIIKGIIPSFWRAPTENDKGGGSCSYLSVWKAAHIDNLSFTAERCSILSTTEHYVK IAVIFLGVRSDDRQASNSDLEKSNVLIQADMTYTIFGSGDVLVNCNVQPSPNLPPLPRVGVKFHLDKSMDRVKWYGRGPFECYPDRKAAAHV | |||
| Full Sequence |
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| Protein Sequence Length: 1113 Download |
| MAALASKLLM PSDNGYRVWE DQTFIKWRKR DSHVPLRCQD SVEGCLKYWQ DRTKVDLLVS 60 NSAVWNDDAV QSALDSAAFW VKDLPFIKSL SGYWKFYLAA TPTSVPHNFH ATVFEDSQWA 120 NLPVPSNWQM HGFDRPIYTN VVYPFPLDPP HVPEDNPTGC YRTYFHLPEE WKGRRILLHF 180 EAVDSAFFAW INGSLVGYSQ DSRLPAEFEI TEYCHPCGSQ SKNVLAVQVL KWSDGSYLED 240 QDQWWLSGIH RDVILLSKPQ VFIGDYFFKS HVGEDFSYAD IQVEVKIDSS LEGRKENFLN 300 NFKLEAVLFD SGSWDNHDGN IDLLSSNMAN VKLSLLSVTT LGFHGYVLGG RLQKPKLWSA 360 EQPHLYTLIV LLKDSSDQIV DCESCLVGIR SITKGPKQLL VNGRPVVIRG VNRHEHHPRL 420 GKTNIEACMD LVLMKQHNIN AVRNSHYPQH SRWYELCDLF GMYMVDEANI ETHGFDFSGH 480 VKHPTLQPSW AAAMLDRVIG MVERDKNHAC IIVWSLGNES GYGPNHSALA GWIRGKDSSR 540 VLHYEGGGSR TSSTDIICPM YMRVWDIVNI ANDPNETRPL ILCEYSHSMG NSTGNLHKYW 600 EAIDNTFGLQ GGFIWDWVDQ ALLKEVGNGR KRWAYGGEFG DIPNDSTFCL NGVTWPDRTP 660 HPALHEVKYL HQAIKISSKD GTLEVLNGHF FSTTEDLEFS WSIYGDGLEL GNGILSLPVI 720 GPRGSYNIEW QSSPWYDLWA SSSALEFFLT ISVKLLHSTR WAEAGHIVSL SQVQLPMKRE 780 FFPHSIKNGS STLVNEILGD SVRVYQQNLW EIKLDVQTGT LESWKVKGVP LIIKGIIPSF 840 WRAPTENDKG GGSCSYLSVW KAAHIDNLSF TAERCSILST TEHYVKIAVI FLGVRSDDRQ 900 ASNSDLEKSN VLIQADMTYT IFGSGDVLVN CNVQPSPNLP PLPRVGVKFH LDKSMDRVKW 960 YGRGPFECYP DRKAAAHVGV YEKNVSEMHV PYIVPGESSG RTDVRWVTFE NKDGVGIYAS 1020 IYGSSPPMQM RASYYSTAEL ERAVHNDDLV EGDDIEVNLD HKHMGVGGDD SWSPCVHEEY 1080 LLPPVPYSFS IRFCPVTPST SGYDAYRSQL LL* 1140 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| smart01038 | Bgal_small_N | 1.0e-94 | 810 | 1093 | 286 | + Beta galactosidase small chain. This domain comprises the small chain of dimeric beta-galactosidases EC:3.2.1.23. This domain is also found in single chain beta-galactosidase. | ||
| pfam02836 | Glyco_hydro_2_C | 2.0e-104 | 396 | 676 | 293 | + Glycosyl hydrolases family 2, TIM barrel domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities. | ||
| COG3250 | LacZ | 1.0e-156 | 87 | 976 | 900 | + Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism] | ||
| PRK09525 | lacZ | 0 | 17 | 1095 | 1123 | + beta-D-galactosidase; Reviewed | ||
| PRK10340 | ebgA | 0 | 88 | 1096 | 1026 | + cryptic beta-D-galactosidase subunit alpha; Reviewed | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0004565 | beta-galactosidase activity |
| GO:0005975 | carbohydrate metabolic process |
| GO:0009341 | beta-galactosidase complex |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002266400.1 | 0 | 1 | 1110 | 1 | 1112 | PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
| RefSeq | XP_002266434.1 | 0 | 1 | 1110 | 1 | 1113 | PREDICTED: hypothetical protein isoform 2 [Vitis vinifera] |
| RefSeq | XP_002299206.1 | 0 | 1 | 1110 | 1 | 1108 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002303929.1 | 0 | 1 | 1111 | 1 | 1112 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002513059.1 | 0 | 1 | 1109 | 1 | 1107 | beta-galactosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3muy_4 | 0 | 87 | 1094 | 51 | 1021 | 1 Chain 1, E. Coli (Lacz) Beta-Galactosidase (R599a) |
| PDB | 3muy_3 | 0 | 87 | 1094 | 51 | 1021 | 1 Chain 1, E. Coli (Lacz) Beta-Galactosidase (R599a) |
| PDB | 3muy_2 | 0 | 87 | 1094 | 51 | 1021 | 1 Chain 1, E. Coli (Lacz) Beta-Galactosidase (R599a) |
| PDB | 3muy_1 | 0 | 87 | 1094 | 51 | 1021 | 1 Chain 1, E. Coli (Lacz) Beta-Galactosidase (R599a) |
| PDB | 1f4h_D | 0 | 87 | 1094 | 49 | 1019 | 1 Chain 1, E. Coli (Lacz) Beta-Galactosidase (R599a) |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO804274 | 390 | 129 | 513 | 0 |
| ES794486 | 405 | 449 | 853 | 0 |
| EL444301 | 298 | 436 | 733 | 0 |
| EG397069 | 272 | 401 | 670 | 0 |
| HO804274 | 50 | 499 | 547 | 0.0000000008 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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