| Basic Information | |
|---|---|
| Species | Cucumis sativus |
| Cazyme ID | Cucsa.310710.1 |
| Family | CBM43 |
| Protein Properties | Length: 489 Molecular Weight: 53216.8 Isoelectric Point: 5.9753 |
| Chromosome | Chromosome/Scaffold: 02995 Start: 455586 End: 458307 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM43 | 368 | 450 | 1.1e-22 |
| WCVLAPSASIDDPQIAPSVSYACENGDCTSLGLGTSCGTLDVRQNISYAFNSYYQIKNQLASACKFPHLSVVTAQDPSVGSCK | |||
| GH17 | 29 | 347 | 0 |
| IGVNWGTQATHPLPPVTVVKLLQDNGIQKVKLFDADPVVLKALGKSGIEVMVGIPNDMLYSLANSMQSAENWVSKNLSSYISSGSVDIRYVAVGNEPFLK TFNGSFIGTTFPALQNVQAAIVKAGLSNRVKVTVPMNADVYQTSTGLPSGGDFRSDIRDLMLSIVKFLSDSASPFTVNIYPFISLYEDPSFPIDYAFFDG FSHALNDEGRLYENVFTANYDTLVSSLQKNGFPNMSIIVGEIGWPTDGDRNANLQFAKRFSQGFISHFVSGQGTPMRPGPIDVYLFSLIDEDAKSILPGN FERHWGLFYYDGRPKYMLQ | |||
| Full Sequence |
|---|
| Protein Sequence Length: 489 Download |
| MESLKFVAAW GFFLALLISS AAVSSVIGIG VNWGTQATHP LPPVTVVKLL QDNGIQKVKL 60 FDADPVVLKA LGKSGIEVMV GIPNDMLYSL ANSMQSAENW VSKNLSSYIS SGSVDIRYVA 120 VGNEPFLKTF NGSFIGTTFP ALQNVQAAIV KAGLSNRVKV TVPMNADVYQ TSTGLPSGGD 180 FRSDIRDLML SIVKFLSDSA SPFTVNIYPF ISLYEDPSFP IDYAFFDGFS HALNDEGRLY 240 ENVFTANYDT LVSSLQKNGF PNMSIIVGEI GWPTDGDRNA NLQFAKRFSQ GFISHFVSGQ 300 GTPMRPGPID VYLFSLIDED AKSILPGNFE RHWGLFYYDG RPKYMLQMTN NTNGLVPASN 360 VKYLAKKWCV LAPSASIDDP QIAPSVSYAC ENGDCTSLGL GTSCGTLDVR QNISYAFNSY 420 YQIKNQLASA CKFPHLSVVT AQDPSVGSCK FIVMTQPSEV AVNEKSKALR HSAESLLFFL 480 CLFILAVM* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 0.0002 | 262 | 339 | 78 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 1.0e-13 | 367 | 433 | 74 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 3.0e-25 | 367 | 451 | 87 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 1.0e-72 | 32 | 347 | 318 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_194843.1 | 0 | 12 | 485 | 10 | 483 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | XP_002324127.1 | 0 | 24 | 488 | 36 | 502 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002331390.1 | 0 | 23 | 457 | 8 | 444 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002528007.1 | 0 | 7 | 482 | 4 | 483 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| RefSeq | XP_002530371.1 | 0 | 23 | 483 | 17 | 482 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3f55_D | 0 | 29 | 349 | 2 | 316 | A Chain A, Crystal Structure Of L-serine-o-acetyltransferase Found In D- Cycloserine Biosynthetic Pathway |
| PDB | 3f55_C | 0 | 29 | 349 | 2 | 316 | A Chain A, Crystal Structure Of L-serine-o-acetyltransferase Found In D- Cycloserine Biosynthetic Pathway |
| PDB | 3f55_B | 0 | 29 | 349 | 2 | 316 | A Chain A, Crystal Structure Of L-serine-o-acetyltransferase Found In D- Cycloserine Biosynthetic Pathway |
| PDB | 3f55_A | 0 | 29 | 349 | 2 | 316 | A Chain A, Crystal Structure Of L-serine-o-acetyltransferase Found In D- Cycloserine Biosynthetic Pathway |
| PDB | 3em5_D | 0 | 29 | 349 | 2 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
