| Basic Information | |
|---|---|
| Species | Cucumis sativus |
| Cazyme ID | Cucsa.321460.1 |
| Family | GH14 |
| Protein Properties | Length: 539 Molecular Weight: 60076.3 Isoelectric Point: 8.6938 |
| Chromosome | Chromosome/Scaffold: 03080 Start: 1229170 End: 1231460 |
| Description | chloroplast beta-amylase |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH14 | 81 | 496 | 0 |
| FVMLPLDTVTLGGSLNKPRAMNASLMALKSAGVEGVMVDAWWGLVEKDGPMKYNWEGYAELVQMVQKHGLKLQVVMSFHQCGGNVGDSCSIPLPPWVLEE ISKNPDLVYTDRSGRRNPEYISLGCDSLPVLRGRTPIQVYADYMRSFRDRFRDYLGEVITEVQVGAGPCGELRYPSYPESNGTWRFPGIGEFQCYDKYMR ASLEAAAEAIGKRDWGSSGGPHDSGQYNQFPEDTGFFKKEGTWKTEYGEFFLAWYSSKLLQHGDSILAAAKGIFRGTGAKLSAKVAGIHWHYGTRSHAAE LTAGYYNTRHRDGYSPIAKMLAKHGVVFNFTCMEMRDGQQPGHANCSPEGLVRQVKMATRDAKVELAGENALERYDGAAYEQILATSRSDSGNGLAAFTY LRMNKNLFEPNNWRNL | |||
| Full Sequence |
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| Protein Sequence Length: 539 Download |
| MTLTLRSSTS FINLKDTKII KAPLLEDLHG IISFKQAKPL SRLRIRSSLQ ETRIERGGEK 60 LEKLHSLSSN HHTNDLRVPV FVMLPLDTVT LGGSLNKPRA MNASLMALKS AGVEGVMVDA 120 WWGLVEKDGP MKYNWEGYAE LVQMVQKHGL KLQVVMSFHQ CGGNVGDSCS IPLPPWVLEE 180 ISKNPDLVYT DRSGRRNPEY ISLGCDSLPV LRGRTPIQVY ADYMRSFRDR FRDYLGEVIT 240 EVQVGAGPCG ELRYPSYPES NGTWRFPGIG EFQCYDKYMR ASLEAAAEAI GKRDWGSSGG 300 PHDSGQYNQF PEDTGFFKKE GTWKTEYGEF FLAWYSSKLL QHGDSILAAA KGIFRGTGAK 360 LSAKVAGIHW HYGTRSHAAE LTAGYYNTRH RDGYSPIAKM LAKHGVVFNF TCMEMRDGQQ 420 PGHANCSPEG LVRQVKMATR DAKVELAGEN ALERYDGAAY EQILATSRSD SGNGLAAFTY 480 LRMNKNLFEP NNWRNLVEFV KSMSEGGRNR RLPESDCCGS DLHVGFIKEK KIKEVAAV* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02905 | PLN02905 | 4.0e-150 | 78 | 503 | 433 | + beta-amylase | ||
| pfam01373 | Glyco_hydro_14 | 7.0e-173 | 81 | 499 | 432 | + Glycosyl hydrolase family 14. This family are beta amylases. | ||
| PLN02803 | PLN02803 | 0 | 1 | 526 | 536 | + beta-amylase | ||
| PLN00197 | PLN00197 | 0 | 78 | 514 | 443 | + beta-amylase; Provisional | ||
| PLN02801 | PLN02801 | 0 | 78 | 503 | 434 | + beta-amylase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000272 | polysaccharide catabolic process |
| GO:0016161 | beta-amylase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN62440.1 | 0 | 1 | 531 | 1 | 532 | hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002282871.1 | 0 | 1 | 531 | 1 | 532 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002326690.1 | 0 | 1 | 535 | 1 | 541 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002329547.1 | 0 | 1 | 538 | 1 | 545 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002517513.1 | 0 | 1 | 536 | 1 | 545 | Beta-amylase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1wdp_A | 0 | 78 | 503 | 12 | 441 | A Chain A, Crystal Structure Of Calg2, Calicheamicin Glycosyltransferase, Tdp And Calicheamicin T0 Bound Form |
| PDB | 1q6c_A | 0 | 78 | 503 | 12 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
| PDB | 1bfn_A | 0 | 78 | 503 | 12 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
| PDB | 1ukp_D | 0 | 78 | 503 | 12 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| PDB | 1ukp_C | 0 | 78 | 503 | 12 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| BU103692 | 535 | 1 | 526 | 0 |
| HO794833 | 410 | 116 | 525 | 0 |
| HO781538 | 406 | 31 | 426 | 0 |
| HO825836 | 375 | 152 | 526 | 0 |
| HO593646 | 414 | 98 | 506 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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