| Basic Information | |
|---|---|
| Species | Cucumis sativus |
| Cazyme ID | Cucsa.322970.1 |
| Family | GH19 |
| Protein Properties | Length: 311 Molecular Weight: 33097.1 Isoelectric Point: 6.4584 |
| Chromosome | Chromosome/Scaffold: 03080 Start: 2520013 End: 2522794 |
| Description | basic chitinase |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH19 | 72 | 303 | 0 |
| GVVSASEFDGMLKHRNDGSCEGNGFYSYEAFVVAAAAFDGFGTTGNLSTRKREVAAFLAQTSYETTGGWATAPDGPYAWGYCYINATQKDQFCVPSPTWP CSSGKLYYGRGPFQIAYNFNYGAAGKAIGVDLLNNPDLVATNPTISFKTALWFWMTSQGDKPSCHDVMTGKWVPSNEDVSAKRLPGYGLTINIINGNNEC GKGADARAADRLGFYQRYCDVLNIQYGDNFNC | |||
| Full Sequence |
|---|
| Protein Sequence Length: 311 Download |
| MTKIYTSFIT LTFVLLTTPA TSSAQSCGGG ESADAMCPKG LCIAGSGLCG SGFLRRCGSD 60 LTFGNPNGGM GGVVSASEFD GMLKHRNDGS CEGNGFYSYE AFVVAAAAFD GFGTTGNLST 120 RKREVAAFLA QTSYETTGGW ATAPDGPYAW GYCYINATQK DQFCVPSPTW PCSSGKLYYG 180 RGPFQIAYNF NYGAAGKAIG VDLLNNPDLV ATNPTISFKT ALWFWMTSQG DKPSCHDVMT 240 GKWVPSNEDV SAKRLPGYGL TINIINGNNE CGKGADARAA DRLGFYQRYC DVLNIQYGDN 300 FNCVNQKPFT * 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3179 | COG3179 | 5.0e-7 | 120 | 227 | 129 | + Predicted chitinase [General function prediction only] | ||
| cd00442 | lysozyme_like | 4.0e-13 | 126 | 265 | 140 | + lysozyme_like domain. This contains several members including Soluble Lytic Transglycosylases (SLT), Goose Egg-White Lysozymes (GEWL), Hen Egg-White Lysozymes (HEWL), chitinases, bacteriophage lambda lysozymes, endolysins, autolysins, and chitosanases. All the members are involved in the hydrolysis of beta-1,4- linked polysaccharides. | ||
| cd00325 | chitinase_glyco_hydro_19 | 4.0e-120 | 74 | 303 | 230 | + Glycoside hydrolase family 19 chitinase domain. Chitinases are enzymes that catalyze the hydrolysis of the beta-1,4-N-acetyl-D-glucosamine linkages in chitin polymers. Family 19 chitinases are found primarily in plants (classes I, III, and IV), but some are found in bacteria. Class I and II chitinases are similar in their catalytic domains. Class I chitinases have an N-terminal cysteine-rich, chitin-binding domain which is separated from the catalytic domain by a proline and glycine-rich hinge region. Class II chitinases lack both the chitin-binding domain and the hinge region. Class IV chitinases are similar to class I chitinases but they are smaller in size due to certain deletions. Despite any significant sequence homology with lysozymes, structural analysis reveals that family 19 chitinases, together with family 46 chitosanases, are similar to several lysozymes including those from T4-phage and from goose. The structures reveal that the different enzyme groups arose from a common ancestor glycohydrolase antecedent to the procaryotic/eucaryotic divergence. | ||
| pfam00182 | Glyco_hydro_19 | 9.0e-121 | 73 | 303 | 232 | + Chitinase class I. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004568 | chitinase activity |
| GO:0006032 | chitin catabolic process |
| GO:0016998 | cell wall macromolecule catabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACL81177.1 | 0 | 24 | 309 | 20 | 315 | chitinase [Chimonanthus praecox] |
| GenBank | ACP43629.2 | 0 | 9 | 310 | 4 | 307 | chitinase [Musa AB Group] |
| DDBJ | BAF47270.1 | 0 | 8 | 309 | 3 | 326 | chitinase C [Ananas comosus] |
| EMBL | CAC81811.1 | 0 | 9 | 309 | 4 | 309 | putative chitinase [Musa acuminata] |
| EMBL | CAC81812.1 | 0 | 24 | 310 | 23 | 317 | putative chitinase [Musa acuminata] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 4dyg_B | 0 | 73 | 309 | 6 | 243 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4dyg_A | 0 | 73 | 309 | 6 | 243 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4dwx_B | 0 | 73 | 309 | 6 | 243 | A Chain A, Crystal Structure Of A Family Gh-19 Chitinase From Rye Seeds |
| PDB | 4dwx_A | 0 | 73 | 309 | 6 | 243 | A Chain A, Crystal Structure Of A Family Gh-19 Chitinase From Rye Seeds |
| PDB | 1dxj_A | 0 | 70 | 309 | 2 | 240 | A Chain A, Structure Of The Chitinase From Jack Bean |
