y
Basic Information | |
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Species | Cucumis sativus |
Cazyme ID | Cucsa.325260.1 |
Family | GH3 |
Protein Properties | Length: 771 Molecular Weight: 82101.8 Isoelectric Point: 7.9145 |
Chromosome | Chromosome/Scaffold: 03127 Start: 64170 End: 69377 |
Description | beta-xylosidase 2 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 79 | 326 | 0 |
AVPRLGIRGYEWWSEALHGVSNVGPGTKFGGTFPGATSFPQVITTAASFNQSLWLLIGRVVSDEARAMYNGGTAGLTYWSPNVNIFRDPRWGRGQETPGE DPILAAKYAANYVQGLQGNDGKKRLKVAACCKHYTAYDLDNWNGVDRYHFNAKVSKQDLEDTYNVPFKACVVEGKVASVMCSYNQVNGKPTCADPDLLKN TIRGAWGLDGYIVSDCDSVGVLYDSQHFTPTPEEAAASTIKAGLDLDC |
Full Sequence |
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Protein Sequence Length: 771 Download |
MANGYSAVAM VVVIVAAAVA LGVPAAEGAA AFACDKRNVG TRNMGFCQES LGIEERVKDL 60 IGRLTLGEKI RLLVNNAIAV PRLGIRGYEW WSEALHGVSN VGPGTKFGGT FPGATSFPQV 120 ITTAASFNQS LWLLIGRVVS DEARAMYNGG TAGLTYWSPN VNIFRDPRWG RGQETPGEDP 180 ILAAKYAANY VQGLQGNDGK KRLKVAACCK HYTAYDLDNW NGVDRYHFNA KVSKQDLEDT 240 YNVPFKACVV EGKVASVMCS YNQVNGKPTC ADPDLLKNTI RGAWGLDGYI VSDCDSVGVL 300 YDSQHFTPTP EEAAASTIKA GLDLDCGPFL AVHTATAVGR GLLKEVDLNN ALANLLSVQM 360 RLGMFDGEPA AQPYGNLGPK DVCTPAHKHL ALEAARQGIV LLQNRAGALP LSPTRHRTVA 420 VIGPNSDATV TMIGNYAGVA CEYTTPVQGI SKYVKTIHAK GCANVACVGD QLIGEAEAAA 480 RVADAAVVVV GLDQSIEAES RDRNGVLLPG KQEELVRRIG LACKGPTVVV LMSGGPIDVS 540 FAKNDGKISG ILWVGYPGQA GGAAIADVLF GATNPGGKLP MTWYPQSYLA KVPMTNMGLR 600 PDPSTGYPGR TYRFYKGPVV FPFGFGLSYS KFSQSFAEAP TKISLPLSSL SPNSSATVKV 660 SHTDCASVSD LPIMIDVKNT GTVDGSHTIL VFSTVPNQTW SPEKHLIGFE KVHLIAGSQK 720 RVRIGIHVCD HLSRVDEFGT RRIPMGEHKL HIGDLTHSIS LQADLQDIKF * 780 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01915 | Glyco_hydro_3_C | 8.0e-53 | 399 | 630 | 240 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
COG1472 | BglX | 3.0e-57 | 60 | 462 | 410 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 8.0e-58 | 51 | 358 | 316 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PRK15098 | PRK15098 | 6.0e-81 | 115 | 726 | 667 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 46 | 763 | 741 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAP83934.1 | 0 | 29 | 765 | 23 | 765 | auxin-induced beta-glucosidase [Chenopodium rubrum] |
GenBank | AAS17751.2 | 0 | 1 | 769 | 1 | 771 | beta xylosidase [Fragaria x ananassa] |
DDBJ | BAF79669.1 | 0 | 32 | 770 | 32 | 774 | beta-D-xylosidase [Pyrus pyrifolia] |
RefSeq | XP_002316021.1 | 0 | 27 | 769 | 23 | 767 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002519194.1 | 0 | 27 | 769 | 37 | 781 | Periplasmic beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 115 | 726 | 91 | 696 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 3u48_A | 0 | 115 | 726 | 91 | 696 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 3u4a_B | 0 | 115 | 726 | 91 | 696 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 3u4a_A | 0 | 115 | 726 | 91 | 696 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2x41_A | 4.00001e-40 | 55 | 762 | 2 | 708 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |