| Basic Information | |
|---|---|
| Species | Cucumis sativus |
| Cazyme ID | Cucsa.327180.1 |
| Family | CE8 |
| Protein Properties | Length: 286 Molecular Weight: 31325.2 Isoelectric Point: 4.5738 |
| Chromosome | Chromosome/Scaffold: 03157 Start: 206185 End: 207769 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CE8 | 15 | 137 | 4.7e-38 |
| TVSLDGTENFIKINDAIAAAPNFSTTRFYIHVKPGTYQEIIEVPYEKTCIALIGDDSSTTIIVNNRSNGTGSSTASSATLTVNGSNFMAQFLTFQNTAGP NEGQAIALLDQATHTAYYKCVFL | |||
| CE8 | 134 | 270 | 1.4e-38 |
| CVFLDCNIYARLFDVQITVTAQSKPSLNSLSGFIFQNCNVTVSPEIAPSKDNVTVFLGRPWRMYSMVVFIDSFLDNVVQPKGWLEWPGVPENLLYYAEYN NSGGGANTSQRVNWPGYHALNNAKEVATFTVETFING | |||
| Full Sequence |
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| Protein Sequence Length: 286 Download |
| VVIVEFSDCF SFNSTVSLDG TENFIKINDA IAAAPNFSTT RFYIHVKPGT YQEIIEVPYE 60 KTCIALIGDD SSTTIIVNNR SNGTGSSTAS SATLTVNGSN FMAQFLTFQN TAGPNEGQAI 120 ALLDQATHTA YYKCVFLDCN IYARLFDVQI TVTAQSKPSL NSLSGFIFQN CNVTVSPEIA 180 PSKDNVTVFL GRPWRMYSMV VFIDSFLDNV VQPKGWLEWP GVPENLLYYA EYNNSGGGAN 240 TSQRVNWPGY HALNNAKEVA TFTVETFING TQWLPQTGIP FRAGF* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN03043 | PLN03043 | 9.0e-67 | 15 | 284 | 312 | + Probable pectinesterase/pectinesterase inhibitor; Provisional | ||
| PLN02933 | PLN02933 | 4.0e-69 | 11 | 285 | 314 | + Probable pectinesterase/pectinesterase inhibitor | ||
| PLN02713 | PLN02713 | 1.0e-70 | 15 | 284 | 312 | + Probable pectinesterase/pectinesterase inhibitor | ||
| PLN02201 | PLN02201 | 3.0e-71 | 7 | 284 | 317 | + probable pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 9.0e-89 | 13 | 270 | 297 | + Pectinesterase. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABM06040.1 | 0 | 7 | 285 | 85 | 402 | At4g33220 [Arabidopsis thaliana] |
| GenBank | ABQ42392.1 | 0 | 13 | 285 | 282 | 594 | pectin methylesterase-like protein [Taiwania cryptomerioides] |
| GenBank | ACN40984.1 | 0 | 13 | 285 | 289 | 600 | unknown [Picea sitchensis] |
| EMBL | CAB36796.1 | 0 | 7 | 285 | 158 | 475 | pectinesterase-like protein [Arabidopsis thaliana] |
| RefSeq | NP_192139.1 | 0 | 12 | 285 | 220 | 532 | pectinesterase family protein [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 13 | 285 | 8 | 319 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 13 | 285 | 4 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2nt9_B | 0.000006 | 14 | 243 | 9 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2nt9_A | 0.000006 | 14 | 243 | 9 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2nt6_B | 0.000006 | 14 | 243 | 9 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| HO778758 | 314 | 11 | 285 | 0 |
| ES850416 | 310 | 12 | 281 | 0 |
| DY801979 | 302 | 13 | 275 | 0 |
| HO852920 | 313 | 13 | 286 | 0 |
| CO361900 | 257 | 64 | 281 | 0 |
| Orthologous Group | |||||
|---|---|---|---|---|---|
| Species | ID | ||||
| Cucumis sativus | Cucsa.327180.1.15.137 | Cucsa.327180.1.15.137 | |||
| Fragaria vesca | mrna31035.1-v1.0-hybrid.12.119 | mrna31035.1-v1.0-hybrid.12.119 | |||
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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