Basic Information | |
---|---|
Species | Cucumis sativus |
Cazyme ID | Cucsa.333910.1 |
Family | GH17 |
Protein Properties | Length: 393 Molecular Weight: 42915.2 Isoelectric Point: 8.7967 |
Chromosome | Chromosome/Scaffold: 03290 Start: 69038 End: 73078 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
---|
NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH17 | 80 | 391 | 0 |
IGVCYSSAGNNLPDAREVVQLYKNNSIKKMRIYNPDTTILNALRGSNIEVIVGIPNTYIEHIVNLSSAANWVQKNIQAYVPYVNFRYIAVGNEVKPPDAI AQYVLPAMSSIYSAISAANLQDQIKVSTVISMSFLSNSSFPPSNGSFSSEAGGFMEPIIKFLAKNGSPLLANVYPYFVYTEINQTISLDYALFMQSPALV ISDGNFKYNSLFESMVDALYVALEKLGGAKVSIVISESGWPSGGGNGATIENAGTYYRNLISFVRNGTPRRPRRAIETYLFAMFDENLKSLEMEKHFGLF TPDKKSKYQLSF |
Full Sequence |
---|
Protein Sequence Length: 393 Download |
MASSSIFFSS FSFVLVLLLG VLISPGFNRL VGLKLGNMAM AMTIEDEDSM ALLPFGGSAS 60 SVGRFIRLPQ CGGPRRTESI GVCYSSAGNN LPDAREVVQL YKNNSIKKMR IYNPDTTILN 120 ALRGSNIEVI VGIPNTYIEH IVNLSSAANW VQKNIQAYVP YVNFRYIAVG NEVKPPDAIA 180 QYVLPAMSSI YSAISAANLQ DQIKVSTVIS MSFLSNSSFP PSNGSFSSEA GGFMEPIIKF 240 LAKNGSPLLA NVYPYFVYTE INQTISLDYA LFMQSPALVI SDGNFKYNSL FESMVDALYV 300 ALEKLGGAKV SIVISESGWP SGGGNGATIE NAGTYYRNLI SFVRNGTPRR PRRAIETYLF 360 AMFDENLKSL EMEKHFGLFT PDKKSKYQLS FS* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 2.0e-6 | 307 | 383 | 84 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 8.0e-120 | 80 | 391 | 314 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAR26001.1 | 0 | 78 | 392 | 31 | 340 | endo-1,3-beta-glucanase [Glycine max] |
GenBank | ACU20860.1 | 0 | 78 | 392 | 31 | 340 | unknown [Glycine max] |
RefSeq | XP_002299791.1 | 0 | 78 | 391 | 26 | 337 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002336706.1 | 0 | 78 | 391 | 11 | 322 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002513528.1 | 0 | 78 | 391 | 31 | 342 | Lichenase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 80 | 392 | 2 | 316 | A Chain A, Medium Resolution Structure Of The Bifunctional Kinase- Methyltransferase Wbdd |
PDB | 3f55_C | 0 | 80 | 392 | 2 | 316 | A Chain A, Medium Resolution Structure Of The Bifunctional Kinase- Methyltransferase Wbdd |
PDB | 3f55_B | 0 | 80 | 392 | 2 | 316 | A Chain A, Medium Resolution Structure Of The Bifunctional Kinase- Methyltransferase Wbdd |
PDB | 3f55_A | 0 | 80 | 392 | 2 | 316 | A Chain A, Medium Resolution Structure Of The Bifunctional Kinase- Methyltransferase Wbdd |
PDB | 3em5_D | 0 | 80 | 392 | 2 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |