Basic Information | |
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Species | Cucumis sativus |
Cazyme ID | Cucsa.336860.1 |
Family | GT47 |
Protein Properties | Length: 792 Molecular Weight: 89878.2 Isoelectric Point: 6.2461 |
Chromosome | Chromosome/Scaffold: 03356 Start: 38638 End: 46620 |
Description | exostosin family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 345 | 698 | 0 |
KRRPLIYIYDLPPGFNSQLLQGRHWKFECVNRMYNERNATMWTDDLYGAEMAFYESILASPHRTLNGEEADFFFVPVLDSCIITRADDAPHLSLRDYMGL RSFLTLDFYKKAHDHIVEQYPYWNRSSGRDHIWFFSWDEGACYAPKEIWNSMMLVHWGNTNSKHNHSTTAYWGDNWDNIPSSKRGNHPCFDPEKDLVVPA WKRPDGSRLSKKLWARPREERKTFFFFNGNLGPAYERGRPESTYSMGIRQKVAEEFGSSPNKEGKLGKQHAADVIVTPLRSENYHEDLASSVFCGVMPGD GWSGRMEDSILQGCIPVIIQDGIFLPYENVLNYDSFAVRIGEDDIPNLINILRG |
Full Sequence |
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Protein Sequence Length: 792 Download |
MAFAQKWNCS WSLGASIASI IGLVTVVHLF FFPLVPSLDN LRRFPNSGFA VNVSTEAYNN 60 HAKEDPAPPI DLTHKFPPDS HNAVVYHGAP WKSHIGQWLS GCDANTKDLQ IVELVGGSGC 120 KNDCNGQGVC NYEFGQCRCF HGYSGEGCSE KVNLECNHPG SEGEPYGPWV VSICSAHCDT 180 TRAMCFCGEG TKYPNRPVAE ACGFQMRPPS EPNGSKVTDW TKADLDNIFT TNGSKSGWCN 240 VDPAEAYASK VQFKEECDCK YDCSLGRFCE LPVSCTCINQ CSGHGHCMGG FCQCNEGWYG 300 VDCSIPSVQT SVREWPQWLL PARIDIPDRL HITEKSFNLK PMVNKRRPLI YIYDLPPGFN 360 SQLLQGRHWK FECVNRMYNE RNATMWTDDL YGAEMAFYES ILASPHRTLN GEEADFFFVP 420 VLDSCIITRA DDAPHLSLRD YMGLRSFLTL DFYKKAHDHI VEQYPYWNRS SGRDHIWFFS 480 WDEGACYAPK EIWNSMMLVH WGNTNSKHNH STTAYWGDNW DNIPSSKRGN HPCFDPEKDL 540 VVPAWKRPDG SRLSKKLWAR PREERKTFFF FNGNLGPAYE RGRPESTYSM GIRQKVAEEF 600 GSSPNKEGKL GKQHAADVIV TPLRSENYHE DLASSVFCGV MPGDGWSGRM EDSILQGCIP 660 VIIQDGIFLP YENVLNYDSF AVRIGEDDIP NLINILRGFN ESEIEFKLSN VRKIWQRFMY 720 REAVMLEAQR QKAVYGIQED WADEYSQLID DDAVATVLQV LHHKLHSDPW RRHVKSNKEF 780 GLPHECLIKN N* |
Functional Domains Download unfiltered results here | ||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
pfam07974 | EGF_2 | 0.002 | 275 | 303 | 31 | + EGF-like domain. This family contains EGF domains found in a variety of extracellular proteins. |
pfam03016 | Exostosin | 3.0e-66 | 345 | 699 | 358 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN80640.1 | 0 | 3 | 781 | 4 | 809 | hypothetical protein [Vitis vinifera] |
EMBL | CBI29877.1 | 0 | 3 | 791 | 32 | 822 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_191322.3 | 0 | 1 | 791 | 1 | 793 | exostosin family protein [Arabidopsis thaliana] |
RefSeq | XP_002277596.1 | 0 | 3 | 791 | 4 | 794 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002308967.1 | 0 | 1 | 791 | 1 | 793 | predicted protein [Populus trichocarpa] |