| Basic Information | |
|---|---|
| Species | Cucumis sativus |
| Cazyme ID | Cucsa.337440.1 |
| Family | GH51 |
| Protein Properties | Length: 709 Molecular Weight: 77903.4 Isoelectric Point: 5.1869 |
| Chromosome | Chromosome/Scaffold: 03356 Start: 515458 End: 525253 |
| Description | alpha-L-arabinofuranosidase 1 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH51 | 256 | 570 | 0 |
| KGVIWFDQVSAMPVETYKGHGFRNDLVQMMADLEPRFIRFPGGCFVEGEWLRNAFRWKETIGPWEQRPGHFGDVWMYWTDDGLGYFEFLQLAEDLGAAPV WVFNNGISHQDQVDTSDISPFVQEALDSIEFARGDSSSTWGSIRASMGHPEPFDLKYIALGNEDCGKKNYRGNYIKIYNAIKRVYPDIEIISNCDGSSVK LDHPADYYDFHIYTSANQMFSMAHKFDKTSRSGPKAFVSEYAVTGSDAGTGSLLAAIAEAAFLIGLEKNSDIVSMASYAPLFVNTNDRRWNPDAIVFNSS HFYGTPSYWVQRFFT | |||
| Full Sequence |
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| Protein Sequence Length: 709 Download |
| MPKPLSTDTQ TLLSSYELQS RLVFYKVNGW SWGRNGAGPI EANLESSDGL YFYSTPRCTF 60 FAIGDDTVQP VRLNVNASDA TRQIPETLFG IFFEEINHAG AGGIWAELVS NRGFEAGGPN 120 TPSNISPWSI IGDESTISVS TDRSSCFDRN KVALRMDVLC DNGGTNSCPT GGVGIYNPGF 180 WGMNIEQGKA YKVTLFVRSL GKIDLSVSLT DSSGLKKLAT TSIISGDVSN WTKMEVLLNA 240 TETNHNSRLQ LTTLKKGVIW FDQVSAMPVE TYKGHGFRND LVQMMADLEP RFIRFPGGCF 300 VEGEWLRNAF RWKETIGPWE QRPGHFGDVW MYWTDDGLGY FEFLQLAEDL GAAPVWVFNN 360 GISHQDQVDT SDISPFVQEA LDSIEFARGD SSSTWGSIRA SMGHPEPFDL KYIALGNEDC 420 GKKNYRGNYI KIYNAIKRVY PDIEIISNCD GSSVKLDHPA DYYDFHIYTS ANQMFSMAHK 480 FDKTSRSGPK AFVSEYAVTG SDAGTGSLLA AIAEAAFLIG LEKNSDIVSM ASYAPLFVNT 540 NDRRWNPDAI VFNSSHFYGT PSYWVQRFFT VSSGATLLDT ALDANSASSL IASAIIWKNA 600 EDDNYYLRIK IVNFGSKQVS LKISVNGLNA YSIRKTGSSQ TVLTSVNLMD ENSLNNPKKV 660 FPVEVPLNSA GKNMDAVAPP HSVTSIDLLM ESSSIRMPGS HHSSASAI* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3534 | AbfA | 2.0e-5 | 523 | 688 | 180 | + Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism] | ||
| pfam06964 | Alpha-L-AF_C | 3.0e-27 | 523 | 682 | 169 | + Alpha-L-arabinofuranosidase C-terminus. This family represents the C-terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase (EC:3.2.1.55). This catalyzes the hydrolysis of nonreducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| COG3534 | AbfA | 2.0e-33 | 276 | 468 | 215 | + Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism] | ||
| smart00813 | Alpha-L-AF_C | 2.0e-34 | 494 | 682 | 199 | + Alpha-L-arabinofuranosidase C-terminus. This entry represents the C terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase. This catalyses the hydrolysis of non-reducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0046373 | L-arabinose metabolic process |
| GO:0046556 | alpha-N-arabinofuranosidase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAP97437.1 | 0 | 54 | 708 | 19 | 675 | alpha-L-arabinofuranosidase [Malus x domestica] |
| GenBank | ABF22680.3 | 0 | 61 | 708 | 24 | 677 | alpha-L-arabinofuranosidase [Prunus persica] |
| GenBank | ABV32544.1 | 0 | 61 | 708 | 24 | 677 | alpha-L-arabinofuranosidase protein [Prunus persica] |
| RefSeq | XP_002307940.1 | 0 | 66 | 708 | 31 | 670 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002523672.1 | 0 | 72 | 708 | 41 | 678 | Alpha-N-arabinofuranosidase 1 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 4atw_F | 8e-19 | 276 | 660 | 48 | 454 | A Chain A, The Crystal Structure Of Arabinofuranosidase |
| PDB | 4atw_E | 8e-19 | 276 | 660 | 48 | 454 | A Chain A, The Crystal Structure Of Arabinofuranosidase |
| PDB | 4atw_D | 8e-19 | 276 | 660 | 48 | 454 | A Chain A, The Crystal Structure Of Arabinofuranosidase |
| PDB | 4atw_C | 8e-19 | 276 | 660 | 48 | 454 | A Chain A, The Crystal Structure Of Arabinofuranosidase |
| PDB | 4atw_B | 8e-19 | 276 | 660 | 48 | 454 | A Chain A, The Crystal Structure Of Arabinofuranosidase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO852683 | 421 | 276 | 694 | 0 |
| JG577027 | 336 | 132 | 465 | 0 |
| HO780740 | 400 | 304 | 703 | 0 |
| HO807291 | 318 | 185 | 500 | 0 |
| GO801860 | 339 | 124 | 462 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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