Basic Information | |
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Species | Cucumis sativus |
Cazyme ID | Cucsa.338760.1 |
Family | GT5 |
Protein Properties | Length: 817 Molecular Weight: 90586.6 Isoelectric Point: 6.6472 |
Chromosome | Chromosome/Scaffold: 03356 Start: 1512899 End: 1521333 |
Description | starch synthase 2 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT5 | 326 | 809 | 0 |
NVIIVAAECAPWSKTGGLGDVAGSLPKALARRGHRVMVIVPRYANYAGLQDTGVRKRYKVHGQDYEVSYFQTYVDGVDFVFIDNSTFHNREQNIYGGDRL DILKRMVLFCKAAIEVPWYVPCGGVCYGDGNLVFVANDWHTALLPVYLKAYYRDSGIMKFTRSILVIHNIAHQGRGPVDDFYHVDLPEHYIDHFKLYDPV GGEHFNIFAAGLKTADRVVTVSHGYAWELKTTEGGWGLHGIINEIDWKMMGIVNGIDSKEWSPEYDVHLTSDGYTNYSLETLQTGKAQCKAALQKELGLP IREDIPLIGFIGRLDQQKGVDIIAEAIPWMVGQNVQLVMLGTGRQDLEQMLRDFENKHRDKIRGWVGFSIKMAHRITAGIDILLMPSRFEPCGLNQLYAM NYGTIPVVHRVGGLRDTVIPFDPFNESGYGWTFDSAEANKLIHALGNCLLTYKQYKKSWEGLQRRGMTQDLSWDHAAEKYEEVL |
Full Sequence |
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Protein Sequence Length: 817 Download |
MASLGSLPFT IEAKTESSMF VLSKNYNRSF CSLKPQNQKP AEGLALLGDK MIVRSGKWPK 60 PMQARAAISD SSGQRSDDPD EAIQATIEKS KKVLAMQQQL LEQIAERKKL VSSIKSTSAD 120 STEKQDSSEQ MDGLLPSPDF PSRNDESSVD VLNGSSLSVS NGNVAVREQL DAVPSSSSRP 180 SDKNDEKQVV DLKKKIYNAD PKDQLKGSSK TTYSDIIPDP KDQLEGSSKT KFSEVLPDPK 240 DQLKGTLKTK SSEILQDSKD QLKGSSKKDS SDFVPAFLSS KSSHSTVKEG KDGQPSEPTL 300 KDDSDSVETA GVGVKPPPLA GVNVMNVIIV AAECAPWSKT GGLGDVAGSL PKALARRGHR 360 VMVIVPRYAN YAGLQDTGVR KRYKVHGQDY EVSYFQTYVD GVDFVFIDNS TFHNREQNIY 420 GGDRLDILKR MVLFCKAAIE VPWYVPCGGV CYGDGNLVFV ANDWHTALLP VYLKAYYRDS 480 GIMKFTRSIL VIHNIAHQGR GPVDDFYHVD LPEHYIDHFK LYDPVGGEHF NIFAAGLKTA 540 DRVVTVSHGY AWELKTTEGG WGLHGIINEI DWKMMGIVNG IDSKEWSPEY DVHLTSDGYT 600 NYSLETLQTG KAQCKAALQK ELGLPIREDI PLIGFIGRLD QQKGVDIIAE AIPWMVGQNV 660 QLVMLGTGRQ DLEQMLRDFE NKHRDKIRGW VGFSIKMAHR ITAGIDILLM PSRFEPCGLN 720 QLYAMNYGTI PVVHRVGGLR DTVIPFDPFN ESGYGWTFDS AEANKLIHAL GNCLLTYKQY 780 KKSWEGLQRR GMTQDLSWDH AAEKYEEVLV AAKYQW* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK14099 | PRK14099 | 8.0e-90 | 325 | 813 | 518 | + glycogen synthase; Provisional | ||
COG0297 | GlgA | 5.0e-142 | 325 | 807 | 504 | + Glycogen synthase [Carbohydrate transport and metabolism] | ||
PRK00654 | glgA | 2.0e-172 | 325 | 808 | 492 | + glycogen synthase; Provisional | ||
TIGR02095 | glgA | 0 | 325 | 812 | 492 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
cd03791 | GT1_Glycogen_synthase_DULL1_like | 0 | 326 | 809 | 490 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
Gene Ontology | |
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GO Term | Description |
GO:0009058 | biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAF13168.1 | 0 | 1 | 816 | 1 | 751 | AF173900_1 granule bound starch synthase II precursor [Manihot esculenta] |
GenBank | ABV25894.1 | 0 | 1 | 816 | 1 | 751 | starch synthase isoform II [Manihot esculenta] |
RefSeq | XP_002278470.1 | 0 | 73 | 816 | 82 | 772 | PREDICTED: similar to starch synthase [Vitis vinifera] |
RefSeq | XP_002324061.1 | 0 | 1 | 816 | 1 | 742 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002531856.1 | 0 | 1 | 816 | 1 | 754 | starch synthase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3vuf_A | 0 | 325 | 810 | 10 | 509 | A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase From White Clover (Trifolium Repens L.), A Family 1 Glycosyl-Hydrolase |
PDB | 3vue_A | 0 | 325 | 810 | 10 | 509 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
PDB | 3d1j_A | 0 | 325 | 808 | 1 | 472 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
PDB | 3guh_A | 0 | 325 | 808 | 1 | 472 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
PDB | 2r4u_A | 0 | 325 | 808 | 1 | 472 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO777841 | 319 | 499 | 817 | 0 |
HO777841 | 191 | 316 | 506 | 0 |
HO781048 | 393 | 425 | 817 | 0 |
HO445868 | 438 | 380 | 817 | 0 |
HO777841 | 70 | 62 | 131 | 0.016 |
Sequence Alignments (This image is cropped. Click for full image.) |
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