Basic Information | |
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Species | Cucumis sativus |
Cazyme ID | Cucsa.338780.1 |
Family | GT5 |
Protein Properties | Length: 221 Molecular Weight: 24934.3 Isoelectric Point: 7.1144 |
Chromosome | Chromosome/Scaffold: 03356 Start: 1528985 End: 1531336 |
Description | starch synthase 2 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT5 | 8 | 214 | 9.8e-37 |
RGHRVMMVIVPRYANYAGLQGTSVRKRYKVHGQDHEVSYFQTYVDGVDFVFIDNSMFHNREQNIYGGGRLVPWYVSCGGVCCGDGNFVFVANDWHTALLS VYLKAYYRDNGIMKFTRSILVIHNIAHQGRGPVDDFYHVDLPEHYIDHFKLYDPVGGEHFNIFAAGLKTAGRVVTGGWGLYGIINEIGWKMMGIVNGIDS EEWSPEY |
Full Sequence |
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Protein Sequence Length: 221 Download |
AAQRKTLRGH RVMMVIVPRY ANYAGLQGTS VRKRYKVHGQ DHEVSYFQTY VDGVDFVFID 60 NSMFHNREQN IYGGGRLVPW YVSCGGVCCG DGNFVFVAND WHTALLSVYL KAYYRDNGIM 120 KFTRSILVIH NIAHQGRGPV DDFYHVDLPE HYIDHFKLYD PVGGEHFNIF AAGLKTAGRV 180 VTGGWGLYGI INEIGWKMMG IVNGIDSEEW SPEYEAIVVS * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG0297 | GlgA | 5.0e-18 | 98 | 214 | 130 | + Glycogen synthase [Carbohydrate transport and metabolism] | ||
PRK00654 | glgA | 3.0e-24 | 1 | 213 | 245 | + glycogen synthase; Provisional | ||
pfam08323 | Glyco_transf_5 | 5.0e-27 | 8 | 193 | 214 | + Starch synthase catalytic domain. | ||
cd03791 | GT1_Glycogen_synthase_DULL1_like | 9.0e-41 | 8 | 213 | 235 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
TIGR02095 | glgA | 4.0e-45 | 8 | 213 | 238 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABA64552.1 | 0 | 8 | 220 | 350 | 589 | starch synthase II [Amaranthus cruentus] |
GenBank | ACL98484.1 | 0 | 8 | 215 | 239 | 473 | starch synthase IIb precursor [Vigna unguiculata] |
RefSeq | NP_186767.1 | 0 | 8 | 220 | 333 | 572 | AtSS2 (starch synthase 2); transferase, transferring glycosyl groups [Arabidopsis thaliana] |
RefSeq | XP_002324061.1 | 0 | 8 | 220 | 283 | 522 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002531856.1 | 0 | 8 | 212 | 295 | 526 | starch synthase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3vuf_A | 7e-25 | 9 | 220 | 43 | 297 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
PDB | 3vue_A | 7e-25 | 9 | 220 | 43 | 297 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
PDB | 1rzv_B | 0.0000002 | 98 | 218 | 136 | 261 | A Chain A, Crystal Structure Of The Glycogen Synthase From Agrobacterium Tumefaciens (Non-Complexed Form) |
PDB | 1rzv_A | 0.0000002 | 98 | 218 | 136 | 261 | A Chain A, Crystal Structure Of The Glycogen Synthase From Agrobacterium Tumefaciens (Non-Complexed Form) |
PDB | 1rzu_B | 0.0000002 | 98 | 218 | 136 | 261 | A Chain A, Crystal Structure Of The Glycogen Synthase From A. Tumefaciens In Complex With Adp |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FG198006 | 236 | 8 | 215 | 0 |
FG136769 | 243 | 6 | 220 | 0 |
EE019535 | 225 | 16 | 212 | 0 |
CK745286 | 221 | 13 | 205 | 0 |
FG140735 | 190 | 8 | 182 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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