Basic Information | |
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Species | Cucumis sativus |
Cazyme ID | Cucsa.341190.1 |
Family | AA3 |
Protein Properties | Length: 596 Molecular Weight: 65257.6 Isoelectric Point: 9.8987 |
Chromosome | Chromosome/Scaffold: 03356 Start: 3577298 End: 3583709 |
Description | Glucose-methanol-choline (GMC) oxidoreductase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA3 | 61 | 590 | 0 |
ENVYDYIIVGGGTAGCPLAATLSKKFNVLLLERGGVPFANSNVSFLSNFHIALADLSPTSASQAFISTDGVLNARARVLGGGTCINAGFYTRASSRFIEK VGWDAKLVNQSYPWVEKQIVHRPKLSPWQTAFRDSLLDVGISPFNGFTYDHLYGTKFGGTIFDRFGRRHTAAELLATADPHKLTVLVYATVQNIVFDTTG KQPKAVGVIFKDENGNRHQAVLRNRRQSEVILSSGALGSPQMLLLSGIGPRADLEKLNISVVLDNEFVGKGMADNPMNTVFVPTNKPIKKSLIQTVGITK FGVYIESSSGFGQSSDSIRCNHGMMSAEIGQLSTIPPKQRTWEAVQAYITRKRDLPQEAFQGGFILEKIANPLSTGQLTLANTNVDDNPSVTFNYFNHPY DLHRCIDGIRTAAKVVQSKHFREYTKNTGETIEKLLNATVKANVNLIPKHTNDTKSLEQFCRDTVITIWHYHGGCHVGKVVSPDLKVLGVSRLRVVDGST FDESPGTNPQATVMMMGRYMGLKILKDRLG |
Full Sequence |
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Protein Sequence Length: 596 Download |
MAFVGTHRLN IPFLLLCLSF ILLSHSSQGA RSYSEFRYPF IKRASSFSSL SSSTYSSGHG 60 ENVYDYIIVG GGTAGCPLAA TLSKKFNVLL LERGGVPFAN SNVSFLSNFH IALADLSPTS 120 ASQAFISTDG VLNARARVLG GGTCINAGFY TRASSRFIEK VGWDAKLVNQ SYPWVEKQIV 180 HRPKLSPWQT AFRDSLLDVG ISPFNGFTYD HLYGTKFGGT IFDRFGRRHT AAELLATADP 240 HKLTVLVYAT VQNIVFDTTG KQPKAVGVIF KDENGNRHQA VLRNRRQSEV ILSSGALGSP 300 QMLLLSGIGP RADLEKLNIS VVLDNEFVGK GMADNPMNTV FVPTNKPIKK SLIQTVGITK 360 FGVYIESSSG FGQSSDSIRC NHGMMSAEIG QLSTIPPKQR TWEAVQAYIT RKRDLPQEAF 420 QGGFILEKIA NPLSTGQLTL ANTNVDDNPS VTFNYFNHPY DLHRCIDGIR TAAKVVQSKH 480 FREYTKNTGE TIEKLLNATV KANVNLIPKH TNDTKSLEQF CRDTVITIWH YHGGCHVGKV 540 VSPDLKVLGV SRLRVVDGST FDESPGTNPQ ATVMMMGRYM GLKILKDRLG KTAGI* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK02106 | PRK02106 | 3.0e-12 | 432 | 577 | 150 | + choline dehydrogenase; Validated | ||
PRK02106 | PRK02106 | 2.0e-27 | 61 | 334 | 317 | + choline dehydrogenase; Validated | ||
pfam05199 | GMC_oxred_C | 3.0e-29 | 432 | 577 | 151 | + GMC oxidoreductase. This domain found associated with pfam00732. | ||
COG2303 | BetA | 8.0e-45 | 61 | 588 | 577 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
PLN02785 | PLN02785 | 0 | 28 | 595 | 568 | + Protein HOTHEAD |
Gene Ontology | |
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GO Term | Description |
GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
GO:0050660 | flavin adenine dinucleotide binding |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI35951.1 | 0 | 34 | 595 | 33 | 593 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002275841.1 | 0 | 34 | 595 | 24 | 584 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002327436.1 | 0 | 55 | 595 | 5 | 547 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002329018.1 | 0 | 26 | 595 | 22 | 591 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002527404.1 | 0 | 38 | 594 | 41 | 596 | glucose-methanol-choline (gmc) oxidoreductase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3red_L | 0 | 61 | 588 | 24 | 518 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
PDB | 3red_K | 0 | 61 | 588 | 24 | 518 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
PDB | 3red_J | 0 | 61 | 588 | 24 | 518 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
PDB | 3red_I | 0 | 61 | 588 | 24 | 518 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
PDB | 3red_H | 0 | 61 | 588 | 24 | 518 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |