Basic Information | |
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Species | Cucumis sativus |
Cazyme ID | Cucsa.342270.1 |
Family | CBM43 |
Protein Properties | Length: 479 Molecular Weight: 50961.6 Isoelectric Point: 5.3957 |
Chromosome | Chromosome/Scaffold: 03356 Start: 4636960 End: 4640195 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 390 | 472 | 2.4e-31 |
WCLPKGGVSDAQLQANLDYACGRGLDCSAIQPGGACFEPNTIASHAAYAMNLFFQNGGRDPWTCDFSQSATLSSNNPSYNGCN | |||
GH17 | 29 | 345 | 0 |
IGINYGQVADNLPPPSATAKLLQSTSIEKVRLYGADPAIIKALANTGIGIVIGAANGDIPALAADLNFAKNWVNANVAPFHPASKIILITVGNEVITSNQ DNLMNQLVPAIQNIQNALNSMSLGDIKVSTVHSMAVLRQSEPPSSGMFHPNYMTVLKELLEFNNATGSPFTINPYPYFAYRSDPRPETLAFCLFQPNAGR LDTNTNIKYMNMFDAQVDAIRSALNSMGFKNVEIVVAETGWPYKGDNDEVGSSLENAKAFNGNLIAHLRSMVGTPLMPGKSVDTYLFALYDEDLKPGPGS ERAFGLFKPDLTMAYDV |
Full Sequence |
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Protein Sequence Length: 479 Download |
MASTILPSTI FVFFTFLLAT EIVYSQSFIG INYGQVADNL PPPSATAKLL QSTSIEKVRL 60 YGADPAIIKA LANTGIGIVI GAANGDIPAL AADLNFAKNW VNANVAPFHP ASKIILITVG 120 NEVITSNQDN LMNQLVPAIQ NIQNALNSMS LGDIKVSTVH SMAVLRQSEP PSSGMFHPNY 180 MTVLKELLEF NNATGSPFTI NPYPYFAYRS DPRPETLAFC LFQPNAGRLD TNTNIKYMNM 240 FDAQVDAIRS ALNSMGFKNV EIVVAETGWP YKGDNDEVGS SLENAKAFNG NLIAHLRSMV 300 GTPLMPGKSV DTYLFALYDE DLKPGPGSER AFGLFKPDLT MAYDVGLSKN GQSTPTSPKT 360 TPVTTPSSPA NNPSTKSPTS PKPKAGGGSW CLPKGGVSDA QLQANLDYAC GRGLDCSAIQ 420 PGGACFEPNT IASHAAYAMN LFFQNGGRDP WTCDFSQSAT LSSNNPSYNG CNYPGGST* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 9.0e-9 | 19 | 338 | 333 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 2.0e-21 | 389 | 460 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 8.0e-38 | 389 | 473 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 4.0e-90 | 29 | 345 | 318 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK95331.1 | 0 | 9 | 477 | 4 | 455 | unknown [Populus trichocarpa] |
EMBL | CBI32582.1 | 0 | 25 | 475 | 55 | 489 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002282736.1 | 0 | 3 | 478 | 2 | 465 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002509479.1 | 0 | 25 | 478 | 24 | 460 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
RefSeq | XP_002510373.1 | 0 | 1 | 477 | 1 | 460 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ghs_B | 0 | 29 | 345 | 1 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 29 | 345 | 1 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 2cyg_A | 0 | 29 | 345 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_B | 0 | 29 | 350 | 3 | 317 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_A | 0 | 29 | 350 | 3 | 317 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |