y
Basic Information | |
---|---|
Species | Cucumis sativus |
Cazyme ID | Cucsa.345770.2 |
Family | GH3 |
Protein Properties | Length: 612 Molecular Weight: 66011.2 Isoelectric Point: 7.3461 |
Chromosome | Chromosome/Scaffold: 03443 Start: 57641 End: 62225 |
Description | beta-D-xylosidase 4 |
View CDS |
External Links |
---|
NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH3 | 8 | 173 | 0 |
LERDPRWGRGQETPGEDPLLSSKYAAGYVRGLQQRDDGDPDRLKVAACCKHYTAYDLDNWKGTDRYHFNAVVSPQDLEDTFQPPFKSCVIDGNVASVMCS YNQVNGKPTCADPDLLAGVIRGQWKLNGYIVSDCDSVDVLYNSQHYTKSPEEAAAKTILAGLDLDC |
Full Sequence |
---|
Protein Sequence Length: 612 Download |
MLLCLKPLER DPRWGRGQET PGEDPLLSSK YAAGYVRGLQ QRDDGDPDRL KVAACCKHYT 60 AYDLDNWKGT DRYHFNAVVS PQDLEDTFQP PFKSCVIDGN VASVMCSYNQ VNGKPTCADP 120 DLLAGVIRGQ WKLNGYIVSD CDSVDVLYNS QHYTKSPEEA AAKTILAGLD LDCGDFLGKH 180 TEAAVTGGLV NEAAISKAVF NNLLTLMRLG FFDGNPSKQL YGKLGPKDVC TPEHQELARE 240 AARQGIVLLK NSPKSLPLSS SAIKSLAVIG PNANVTKTMI GNYEGTPCKY TTPLQGLSAV 300 VSTSFQPGCA NVACTSAQLD EAKKIAASAD ATVLVVGSDQ SIEAESRDRV DLNLPGQQAL 360 LITEVAKASK GPVILVIMTG GGMDITFAKK DDKITSILWV GFPGEAGGAA IADVIFGSFN 420 PSGRLPMTWY PQSYVEKVPM TDMRMRPSAS NGFPGRTYRF YTGETIYSFG DGLSYSDFKH 480 HLVKAPKLVS IPLEEGHICH SSKCHSLEVV QESCQNLGFD VHLRVKNVGQ RSGSHTVFLY 540 STPPSVHNSP QKHLLGFEKV SLGRGGETVV RFKVDVCKDL SVADEVGSRK VALGLHILHV 600 GTLKHSLNVK V* 660 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1472 | BglX | 6.0e-38 | 8 | 309 | 307 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 2.0e-47 | 10 | 199 | 193 | + Glycosyl hydrolase family 3 N terminal domain. | ||
pfam01915 | Glyco_hydro_3_C | 9.0e-55 | 268 | 476 | 216 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 7.0e-71 | 10 | 595 | 636 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 10 | 611 | 620 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI39114.1 | 0 | 10 | 611 | 173 | 774 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002264183.1 | 0 | 10 | 611 | 365 | 966 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002268626.1 | 0 | 10 | 611 | 167 | 768 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002298197.1 | 0 | 10 | 611 | 138 | 741 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002513707.1 | 0 | 10 | 611 | 175 | 777 | Beta-glucosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 8 | 574 | 134 | 696 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |
PDB | 3u48_A | 0 | 8 | 574 | 134 | 696 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |
PDB | 3u4a_B | 0 | 8 | 574 | 134 | 696 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |
PDB | 3u4a_A | 0 | 8 | 574 | 134 | 696 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |
PDB | 3zz1_A | 2e-33 | 7 | 591 | 116 | 687 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
HO798199 | 339 | 268 | 606 | 0 |
EC924436 | 304 | 308 | 611 | 0 |
HO799547 | 321 | 43 | 363 | 0 |
DT556104 | 292 | 67 | 358 | 0 |
CF513655 | 265 | 348 | 612 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|