| Basic Information | |
|---|---|
| Species | Cucumis sativus |
| Cazyme ID | Cucsa.353160.7 |
| Family | CBM22 |
| Protein Properties | Length: 911 Molecular Weight: 101500 Isoelectric Point: 5.9964 |
| Chromosome | Chromosome/Scaffold: 03533 Start: 785065 End: 791381 |
| Description | glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM22 | 199 | 335 | 1.6e-29 |
| NISLNPRFDDDLKNWSGRGCKIALHDSMGNGKVLPQSGKFFASAMERLQSWNGIQQEITGRVQRKVAYDVAAVVRVFGNNITSTDVRATLWVQTPNSREQ YIGIANVQATDKDWVQLQGKFLLNASPSKVVIYIEGP | |||
| CBM22 | 29 | 167 | 1.6e-30 |
| NILLNHDFSMGLQHWHPNCCNGYINLAESNNRDEAFINTCAKYAVVTDRNEGWHGLEQEITNNISPGTTYSVSASVGVSGSLQGSVDVLATLKLVYKDST TNYLCIGRTSVLKEKWEKLEGTFSLSTMPDRVVFYLEGP | |||
| CBM22 | 370 | 511 | 3.59994e-42 |
| NIIMNNNLSNGTKGWFPLGSCTLSVGTGSPHIVPPMARDPLGPSQPLSGRYILATNRTETWMGPAQMITDKVKPFHTYQVSAWVKIGSRATGAQIVNVAV GVDDQWVNGGQVEISNDRWHEIGGSFRIEKQAEKIIVYVQGP | |||
| GH10 | 566 | 835 | 0 |
| QMQNSFPFGTCISRTNIDNEDFVNFFVKNFNWAVFGNELKWYWTEPQQGNFNYRDADELLDFCKSHNIETRGHCIFWEVQDTVQQWIQSLNKNDMMAAVH NRLTGLLTRYKGKFKHYDVNNEMLHGSFYQDHLGKDIRADMFKHANKLDPSALLFVNDYHVEDGCDGRSSPEKYVDQILQLQEQGAPVGGVGIQGHIDCP VGPIVCSALDKIGILGLPIWFTELDVSSINEHVRADDLEVMLREAYAHPAVEGIMLWGFWEMFMCRDNSH | |||
| Full Sequence |
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| Protein Sequence Length: 911 Download |
| MTSTQENNAS GVPEGMEESL TKLSPRAANI LLNHDFSMGL QHWHPNCCNG YINLAESNNR 60 DEAFINTCAK YAVVTDRNEG WHGLEQEITN NISPGTTYSV SASVGVSGSL QGSVDVLATL 120 KLVYKDSTTN YLCIGRTSVL KEKWEKLEGT FSLSTMPDRV VFYLEGPSPG IDLLIQSVEI 180 TCACPNELET GIANAGDENI SLNPRFDDDL KNWSGRGCKI ALHDSMGNGK VLPQSGKFFA 240 SAMERLQSWN GIQQEITGRV QRKVAYDVAA VVRVFGNNIT STDVRATLWV QTPNSREQYI 300 GIANVQATDK DWVQLQGKFL LNASPSKVVI YIEGPPSGVD ILIDSFVVKQ AQKISSSPPP 360 RAENLAYGFN IIMNNNLSNG TKGWFPLGSC TLSVGTGSPH IVPPMARDPL GPSQPLSGRY 420 ILATNRTETW MGPAQMITDK VKPFHTYQVS AWVKIGSRAT GAQIVNVAVG VDDQWVNGGQ 480 VEISNDRWHE IGGSFRIEKQ AEKIIVYVQG PAPSVDLMVA GLQVFPVDRR ARLRYLRTQT 540 DKIRKRDITL KFLGSCSGGI FVKVRQMQNS FPFGTCISRT NIDNEDFVNF FVKNFNWAVF 600 GNELKWYWTE PQQGNFNYRD ADELLDFCKS HNIETRGHCI FWEVQDTVQQ WIQSLNKNDM 660 MAAVHNRLTG LLTRYKGKFK HYDVNNEMLH GSFYQDHLGK DIRADMFKHA NKLDPSALLF 720 VNDYHVEDGC DGRSSPEKYV DQILQLQEQG APVGGVGIQG HIDCPVGPIV CSALDKIGIL 780 GLPIWFTELD VSSINEHVRA DDLEVMLREA YAHPAVEGIM LWGFWEMFMC RDNSHLVNAE 840 GEINEAGKRY LALKQEWLSH ASGQIDERSE FRFRGFQGTY EVQIVNGSKK TSKTFIVEKG 900 DTPVEISIDL * 960 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02018 | CBM_4_9 | 1.0e-14 | 28 | 169 | 145 | + Carbohydrate binding domain. This family includes diverse carbohydrate binding domains. | ||
| pfam02018 | CBM_4_9 | 2.0e-18 | 370 | 514 | 153 | + Carbohydrate binding domain. This family includes diverse carbohydrate binding domains. | ||
| COG3693 | XynA | 7.0e-37 | 542 | 824 | 311 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
| smart00633 | Glyco_10 | 7.0e-77 | 604 | 849 | 267 | + Glycosyl hydrolase family 10. | ||
| pfam00331 | Glyco_hydro_10 | 1.0e-78 | 569 | 826 | 275 | + Glycosyl hydrolase family 10. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| GO:0016798 | hydrolase activity, acting on glycosyl bonds |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAX33301.1 | 0 | 1 | 910 | 1 | 915 | putative endo-1,4-beta-xylanase [Populus tremula x Populus tremuloides] |
| RefSeq | XP_002283550.1 | 0 | 17 | 910 | 82 | 981 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002301133.1 | 0 | 27 | 910 | 162 | 1049 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002301133.1 | 0 | 29 | 524 | 2 | 484 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002301133.1 | 0 | 198 | 519 | 1 | 309 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1xyz_B | 5e-31 | 574 | 828 | 40 | 311 | A Chain A, A Common Protein Fold And Similar Active Site In Two Distinct Families Of Beta-Glycanases |
| PDB | 1xyz_A | 5e-31 | 574 | 828 | 40 | 311 | A Chain A, A Common Protein Fold And Similar Active Site In Two Distinct Families Of Beta-Glycanases |
| PDB | 1i1x_A | 5e-29 | 573 | 823 | 18 | 268 | A Chain A, A Common Protein Fold And Similar Active Site In Two Distinct Families Of Beta-Glycanases |
| PDB | 1i1w_A | 5e-29 | 573 | 823 | 18 | 268 | A Chain A, 0.89a Ultra High Resolution Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
| PDB | 2bnj_A | 1e-28 | 573 | 823 | 18 | 268 | A Chain A, The Xylanase Ta From Thermoascus Aurantiacus Utilizes Arabinose Decorations Of Xylan As Significant Substrate Specificity Determinants |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EB442796 | 298 | 397 | 691 | 0 |
| EX570690 | 295 | 617 | 911 | 0 |
| GO850973 | 328 | 495 | 819 | 0 |
| EB442796 | 120 | 224 | 343 | 0.000006 |
| EB442796 | 113 | 68 | 180 | 0.005 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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