Basic Information | |
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Species | Cucumis sativus |
Cazyme ID | Cucsa.355790.2 |
Family | CBM43 |
Protein Properties | Length: 441 Molecular Weight: 47684.1 Isoelectric Point: 5.8948 |
Chromosome | Chromosome/Scaffold: 03577 Start: 343141 End: 345941 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 360 | 438 | 3.6e-30 |
CVAKDGADEDKLQDGLNWACGQGGANCAAIQQGRPCFLPNNITDHASYAYNDYYQKMRGAGGTCDFDSTAMLTTVDPSK | |||
GH17 | 25 | 345 | 0 |
VGVNLGTGVSNLPSASDIVAILKSHQITHLRLYNADFQLLKALTNSSIEVIVGVTNEEVLRIGESPAAAAAWVNKNVAAHLPGTNITAIAVGSEVLTTIP HVGPVLVPAMYSLHKALVAANLNYLIKVSTPQSMDIIPRAFPPSTASFDASWNSTIYQLLQFLKNTKSFYMLNAYPYYGYTSGNGSFPLDYALFRSLPTI KQIVDPNTLFHYNSMFDALVDATYYSIEAFNFSGIPVVVTETGWPSFGGANEPDATIQNAGTYISNLIRRVSNDSGPPSQPTIPINTYIYELFNEDKRPG PISEKNWGILFPNGSAVYPLS |
Full Sequence |
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Protein Sequence Length: 441 Download |
MRERWRGIVI LLLFGMCINA LGAFVGVNLG TGVSNLPSAS DIVAILKSHQ ITHLRLYNAD 60 FQLLKALTNS SIEVIVGVTN EEVLRIGESP AAAAAWVNKN VAAHLPGTNI TAIAVGSEVL 120 TTIPHVGPVL VPAMYSLHKA LVAANLNYLI KVSTPQSMDI IPRAFPPSTA SFDASWNSTI 180 YQLLQFLKNT KSFYMLNAYP YYGYTSGNGS FPLDYALFRS LPTIKQIVDP NTLFHYNSMF 240 DALVDATYYS IEAFNFSGIP VVVTETGWPS FGGANEPDAT IQNAGTYISN LIRRVSNDSG 300 PPSQPTIPIN TYIYELFNED KRPGPISEKN WGILFPNGSA VYPLSSMSGR ATANSSVVYC 360 VAKDGADEDK LQDGLNWACG QGGANCAAIQ QGRPCFLPNN ITDHASYAYN DYYQKMRGAG 420 GTCDFDSTAM LTTVDPSKLF * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 2.0e-5 | 257 | 334 | 81 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 6.0e-22 | 359 | 430 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 1.0e-36 | 359 | 437 | 79 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 2.0e-78 | 25 | 345 | 321 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAH57260.1 | 0 | 17 | 440 | 20 | 443 | AT3G13560 [Arabidopsis thaliana] |
EMBL | CAN72077.1 | 0 | 26 | 437 | 27 | 439 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_187965.1 | 0 | 17 | 437 | 20 | 440 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002283548.1 | 0 | 26 | 437 | 27 | 439 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002297638.1 | 0 | 36 | 437 | 1 | 402 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 25 | 345 | 1 | 311 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_B | 0 | 25 | 345 | 3 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_A | 0 | 25 | 345 | 3 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur7_B | 0 | 25 | 345 | 3 | 313 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 0 | 25 | 345 | 3 | 313 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |