y
Basic Information | |
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Species | Cucumis sativus |
Cazyme ID | Cucsa.356120.1 |
Family | GH35 |
Protein Properties | Length: 804 Molecular Weight: 89537.9 Isoelectric Point: 7.0529 |
Chromosome | Chromosome/Scaffold: 03577 Start: 852351 End: 854762 |
Description | beta-galactosidase 7 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 13 | 315 | 0 |
IINGERRVIFSGSIHYPRSTDAMWPDLIQKAKDGGLDAIETYIFWDRHEPQRQKYDFSGHLNFIKFFQLVQDAGLYIVMRIGPYVCAEWNYGGFPLWLHN MPGIQLRTDNQVYKNEMLTFTTKIVNMCKQANLFASQGGPIILAQIENEYGNVMTPYGNAGKAYINWCAQMAESLNIGVPWIMCQQSDAPQPIINTCNGF YCDSFSPNNPKSPKMFTENWVGWFKKWGDKDPYRSAEDVAFSVARFFQSGGVFNNYYMYHGGTNFGRTSGGPFITTSYDYNAPLDEYGNLNQPKWGHLKQ LHS |
Full Sequence |
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Protein Sequence Length: 804 Download |
MGDNVSYDSN AIIINGERRV IFSGSIHYPR STDAMWPDLI QKAKDGGLDA IETYIFWDRH 60 EPQRQKYDFS GHLNFIKFFQ LVQDAGLYIV MRIGPYVCAE WNYGGFPLWL HNMPGIQLRT 120 DNQVYKNEML TFTTKIVNMC KQANLFASQG GPIILAQIEN EYGNVMTPYG NAGKAYINWC 180 AQMAESLNIG VPWIMCQQSD APQPIINTCN GFYCDSFSPN NPKSPKMFTE NWVGWFKKWG 240 DKDPYRSAED VAFSVARFFQ SGGVFNNYYM YHGGTNFGRT SGGPFITTSY DYNAPLDEYG 300 NLNQPKWGHL KQLHSSIKLG EKILTNGTHS NKTFGSFVTL TKFSNPTTKE RFCFLSNTDD 360 TNDATIDLQA DGKYFVPAWS VSIIDGCKKE VFNTAKINSQ TSMFVKVQNE KENVKLSWVW 420 APEAMSDTLQ GKGTFKENLL LEQKGTTIDS SDYLWYMTNV ETNGTSSIHN VTLQVNTKGH 480 VLHAFVNTRY IGSQWGNNGQ SFVFEKPILL KAGTNIITLL SATVGLKNYD AFYDTLPTGI 540 DGGPIYLIGD GNVTTNLSSN LWSYKVGLNG EIKQLYNPVF SQETSWNTLN KNSIGRRMTW 600 YKTSFKTPSG IDPVTLDMQG MGKGEAWING QSIGRFWPSF IAGNDNCSET CDYRGAYDPS 660 KCVGNCGNPS QRWYHIPRSF LSNNTNTLVL FEEIGGSPQQ VSVQTITIGT ICGNANEGST 720 LELSCQGEYI ISEIQFASYG NPKGKCGSFK QGSWDVTNSA LLLEKTCKDM KSCSVDVSAK 780 LFGLGDAVNL SARLVVQALC SKK* 840 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02140 | Gal_Lectin | 1.0e-6 | 723 | 800 | 83 | + Galactose binding lectin domain. | ||
pfam02449 | Glyco_hydro_42 | 3.0e-7 | 27 | 181 | 176 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
COG1874 | LacA | 7.0e-22 | 5 | 307 | 357 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 1.0e-152 | 11 | 317 | 322 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 4 | 801 | 823 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAJ09953.1 | 0 | 4 | 800 | 24 | 827 | beta-galactosidase [Mangifera indica] |
EMBL | CBI27773.1 | 0 | 5 | 800 | 40 | 835 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002324727.1 | 0 | 35 | 765 | 1 | 744 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002326135.1 | 0 | 5 | 801 | 30 | 824 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002516237.1 | 0 | 5 | 800 | 25 | 825 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 0 | 9 | 313 | 12 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 2e-37 | 4 | 304 | 10 | 322 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 2e-37 | 4 | 304 | 10 | 322 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO778160 | 719 | 4 | 710 | 0 |
HO780602 | 610 | 55 | 657 | 0 |
DY264749 | 366 | 154 | 519 | 0 |
FC915116 | 313 | 154 | 466 | 0 |
HO780602 | 35 | 661 | 695 | 0.00002 |
Sequence Alignments (This image is cropped. Click for full image.) |
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