Basic Information | |
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Species | Cucumis sativus |
Cazyme ID | Cucsa.356270.1 |
Family | CBM43 |
Protein Properties | Length: 492 Molecular Weight: 54220.6 Isoelectric Point: 6.3055 |
Chromosome | Chromosome/Scaffold: 03577 Start: 991635 End: 995494 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 371 | 452 | 1.4e-25 |
WCVMKPSAHLEDSQVAPSVSYACYHADCTSLGYGTSCSGLDARSNISYAFNSYYQRNNQAEDACKFSGLSTVTNNDPSFGSC | |||
GH17 | 32 | 350 | 0 |
IGANWGTQSSHPLPPETVVRMLRDNQIQKVKLFDADYGTLRALGKTGIEVMVGIPNDMLSTFASNEKAAEKWVSKNVSVHISENNVNIRYVAVGNEPFLA TYNGSFLSTTFPALRNVQKALIKANLGNQVKVTCPLNADVYASTTTFPSGGDFRSDIHDLMLDIVKFLSDSGSPFTVNIYPFISLYSDPNFPVEYAFFDG NASPIVDGQTTYFNMFDANYDTLVWALQKNGFGNLPIIVGEIGWPTDGDRNANPIYAQRFNQGFMSHILGGKGTPMRPGPIDTYLFSLIDEDAKSIDPGN FERHWGIFYYDGRPKYQLS |
Full Sequence |
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Protein Sequence Length: 492 Download |
MSFNSKMGCC WFLRCIVVLV LLLSVVCSVK AIGANWGTQS SHPLPPETVV RMLRDNQIQK 60 VKLFDADYGT LRALGKTGIE VMVGIPNDML STFASNEKAA EKWVSKNVSV HISENNVNIR 120 YVAVGNEPFL ATYNGSFLST TFPALRNVQK ALIKANLGNQ VKVTCPLNAD VYASTTTFPS 180 GGDFRSDIHD LMLDIVKFLS DSGSPFTVNI YPFISLYSDP NFPVEYAFFD GNASPIVDGQ 240 TTYFNMFDAN YDTLVWALQK NGFGNLPIIV GEIGWPTDGD RNANPIYAQR FNQGFMSHIL 300 GGKGTPMRPG PIDTYLFSLI DEDAKSIDPG NFERHWGIFY YDGRPKYQLS LGNSNGTLVG 360 ARGVHYLERK WCVMKPSAHL EDSQVAPSVS YACYHADCTS LGYGTSCSGL DARSNISYAF 420 NSYYQRNNQA EDACKFSGLS TVTNNDPSFG SCRFDIMIEP YYGGAEGRSG FCFTRLLMLL 480 FGFVLVMLTA L* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 1.0e-6 | 196 | 342 | 150 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 2.0e-16 | 370 | 441 | 79 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 4.0e-30 | 370 | 454 | 87 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 4.0e-76 | 32 | 350 | 322 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAL24251.1 | 0 | 31 | 478 | 21 | 469 | AT5g58090/k21l19_70 [Arabidopsis thaliana] |
EMBL | CBI38945.1 | 0 | 25 | 491 | 17 | 483 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_200617.2 | 0 | 31 | 478 | 21 | 469 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002331390.1 | 0 | 19 | 464 | 1 | 448 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002530371.1 | 0 | 7 | 491 | 1 | 482 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ghr_A | 0 | 32 | 351 | 1 | 306 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 1aq0_B | 0 | 32 | 351 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 1aq0_A | 0 | 32 | 351 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 2cyg_A | 0 | 32 | 351 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 32 | 351 | 2 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |