Basic Information | |
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Species | Cucumis sativus |
Cazyme ID | Cucsa.356270.2 |
Family | CBM43 |
Protein Properties | Length: 401 Molecular Weight: 44409.5 Isoelectric Point: 6.2396 |
Chromosome | Chromosome/Scaffold: 03577 Start: 991635 End: 995494 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 280 | 361 | 9.8e-26 |
WCVMKPSAHLEDSQVAPSVSYACYHADCTSLGYGTSCSGLDARSNISYAFNSYYQRNNQAEDACKFSGLSTVTNNDPSFGSC | |||
GH17 | 30 | 259 | 0 |
MLTLGNEPFLATYNGSFLSTTFPALRNVQKALIKANLGNQVKVTCPLNADVYASTTTFPSGGDFRSDIHDLMLDIVKFLSDSGSPFTVNIYPFISLYSDP NFPVEYAFFDGNASPIVDGQTTYFNMFDANYDTLVWALQKNGFGNLPIIVGEIGWPTDGDRNANPIYAQRFNQGFMSHILGGKGTPMRPGPIDTYLFSLI DEDAKSIDPGNFERHWGIFYYDGRPKYQLS |
Full Sequence |
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Protein Sequence Length: 401 Download |
MICYPLLLAM KKQLRNGFLR MSLFTLVKTM LTLGNEPFLA TYNGSFLSTT FPALRNVQKA 60 LIKANLGNQV KVTCPLNADV YASTTTFPSG GDFRSDIHDL MLDIVKFLSD SGSPFTVNIY 120 PFISLYSDPN FPVEYAFFDG NASPIVDGQT TYFNMFDANY DTLVWALQKN GFGNLPIIVG 180 EIGWPTDGDR NANPIYAQRF NQGFMSHILG GKGTPMRPGP IDTYLFSLID EDAKSIDPGN 240 FERHWGIFYY DGRPKYQLSL GNSNGTLVGA RGVHYLERKW CVMKPSAHLE DSQVAPSVSY 300 ACYHADCTSL GYGTSCSGLD ARSNISYAFN SYYQRNNQAE DACKFSGLST VTNNDPSFGS 360 CRFDIMIEPY YGGAEGRSGF CFTRLLMLLF GFVLVMLTAL * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 5.0e-7 | 105 | 251 | 150 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 1.0e-16 | 279 | 350 | 79 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 1.0e-30 | 279 | 363 | 87 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 1.0e-52 | 52 | 259 | 211 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI38945.1 | 0 | 31 | 400 | 114 | 483 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_200617.2 | 0 | 6 | 387 | 87 | 469 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002273826.1 | 0 | 31 | 400 | 196 | 565 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002331390.1 | 0 | 31 | 373 | 104 | 448 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002530371.1 | 0 | 31 | 400 | 113 | 482 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ghr_A | 5e-34 | 52 | 260 | 104 | 306 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1aq0_B | 5e-34 | 52 | 260 | 104 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 1aq0_A | 5e-34 | 52 | 260 | 104 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 2cyg_A | 5e-33 | 51 | 260 | 106 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 3e-32 | 31 | 259 | 89 | 314 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO797198 | 346 | 31 | 376 | 0 |
EY783741 | 278 | 36 | 312 | 0 |
CD438848 | 292 | 55 | 343 | 0 |
JG872839 | 286 | 36 | 320 | 0 |
AM721378 | 297 | 31 | 327 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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