| Basic Information | |
|---|---|
| Species | Cucumis sativus |
| Cazyme ID | Cucsa.356970.2 |
| Family | GT1 |
| Protein Properties | Length: 598 Molecular Weight: 66216.5 Isoelectric Point: 7.2531 |
| Chromosome | Chromosome/Scaffold: 03577 Start: 1917980 End: 1958920 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT1 | 161 | 571 | 0 |
| IVGTRGDVQPFVSIGKRLQEHGHRVRLATHANFKDFVLSTGLEFFPLGGDAKVLADYMVKNKGFLPSGPSEIHAQRNHLKDIIFSLLPACQDDDPESKIP FKADAIIANPPAYGHTQVAEALKLPLHVFFTMPWTPTSDFPHPLAHVKHQMGYRLSYNIVDTLIWLGIRDIINSFRKKKLKLRRISYLSGHYSSLPEVPY GYIWSPHLIPKPKDWGSKIDVVGFCFLDLASNYQPPNSLVEWIEAGERPIYIGFGSLPVEQPQEMTQIIVEALEITGRRGIINKGWGGLGSLAEPKDFVY VLDNCPHDWLFPRCMAVVHHGGAGTTAAGLKAACPTTIVPIFGDQQFWGERVHARGLGPPPIPIAEFSLEKLIDAINFMLDPKVKERTLEVSKAIESEDG VGGAVNAFHKH | |||
| Full Sequence |
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| Protein Sequence Length: 598 Download |
| MAHLEIHHSP HSSSGRSSDF SVSMDSDGDG DSDGDRVVPS SGNTDRNSSG DSTQDGSSVG 60 RELVSCSTKP TKLRKSRQSH ALHHLLPNIF DEKVSSRKKL RWLKRVATVK HDGTVQMEVL 120 EGIQPENLHF ETGVDDEAVD DEPLDTANVP FIPPLQIVML IVGTRGDVQP FVSIGKRLQE 180 HGHRVRLATH ANFKDFVLST GLEFFPLGGD AKVLADYMVK NKGFLPSGPS EIHAQRNHLK 240 DIIFSLLPAC QDDDPESKIP FKADAIIANP PAYGHTQVAE ALKLPLHVFF TMPWTPTSDF 300 PHPLAHVKHQ MGYRLSYNIV DTLIWLGIRD IINSFRKKKL KLRRISYLSG HYSSLPEVPY 360 GYIWSPHLIP KPKDWGSKID VVGFCFLDLA SNYQPPNSLV EWIEAGERPI YIGFGSLPVE 420 QPQEMTQIIV EALEITGRRG IINKGWGGLG SLAEPKDFVY VLDNCPHDWL FPRCMAVVHH 480 GGAGTTAAGL KAACPTTIVP IFGDQQFWGE RVHARGLGPP PIPIAEFSLE KLIDAINFML 540 DPKVKERTLE VSKAIESEDG VGGAVNAFHK HFHRNRTLAK PEAPKRGFSV RRLLHIS* 600 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG1819 | COG1819 | 6.0e-31 | 157 | 576 | 433 | + Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | ||
| pfam03033 | Glyco_transf_28 | 5.0e-31 | 157 | 298 | 142 | + Glycosyltransferase family 28 N-terminal domain. The glycosyltransferase family 28 includes monogalactosyldiacylglycerol synthase (EC 2.4.1.46) and UDP-N-acetylglucosamine transferase (EC 2.4.1.-). This N-terminal domain contains the acceptor binding site and likely membrane association site. This family also contains a large number of proteins that probably have quite distinct activities. | ||
| cd03784 | GT1_Gtf_like | 3.0e-115 | 157 | 571 | 419 | + This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0005975 | carbohydrate metabolic process |
| GO:0008152 | metabolic process |
| GO:0016758 | transferase activity, transferring hexosyl groups |
| GO:0030259 | lipid glycosylation |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAC22617.1 | 0 | 12 | 597 | 7 | 602 | UDP-glucose:sterol 3-O-glucosyltransferase [Panax ginseng] |
| GenBank | EEC76698.1 | 0 | 43 | 594 | 45 | 599 | hypothetical protein OsI_14701 [Oryza sativa Indica Group] |
| RefSeq | XP_002301763.1 | 0 | 71 | 572 | 7 | 509 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002512608.1 | 0 | 7 | 584 | 8 | 580 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
| RefSeq | XP_002521125.1 | 0 | 21 | 582 | 49 | 608 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3h4t_A | 5e-32 | 155 | 577 | 1 | 386 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
| PDB | 3h4i_A | 5e-32 | 155 | 577 | 1 | 386 | A Chain A, Chimeric Glycosyltransferase For The Generation Of Novel Natural Products |
| PDB | 1rrv_B | 3e-21 | 155 | 555 | 1 | 383 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
| PDB | 1rrv_A | 3e-21 | 155 | 555 | 1 | 383 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
| PDB | 1pnv_B | 6e-19 | 155 | 584 | 1 | 395 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| GT046352 | 335 | 164 | 498 | 0 |
| GO883166 | 328 | 123 | 450 | 0 |
| JG555223 | 254 | 81 | 333 | 0 |
| HO626576 | 425 | 153 | 572 | 0 |
| GT046352 | 26 | 491 | 516 | 0.037 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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