Basic Information | |
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Species | Cucumis sativus |
Cazyme ID | Cucsa.356980.1 |
Family | GH3 |
Protein Properties | Length: 627 Molecular Weight: 68680 Isoelectric Point: 7.176 |
Chromosome | Chromosome/Scaffold: 03577 Start: 1976764 End: 1979949 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 104 | 338 | 0 |
LSTRLGIPMIYGIDAVHGHNNVYNATIFPHNIGLGATRDPQLLKRIGVASAREIRATGIPYAFAPCVAVCRDPRWGRCYESYGEDPKIVQEMTEIIPGLQ GEIPPNSRKGVPYVAGKENVVACAKHYVGDGGTTKGIDENNTVIDRHGLLSIHMPGYYHSIIKGVATIMVSYSSWNGEKMHANKNLVTDFLKNTLHFQGF VISDWEAIDRITDPPHANYTYSILASITAGLDMIM |
Full Sequence |
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Protein Sequence Length: 627 Download |
MAKAIILIAL LLICCFETGA KAENFKYKDP TQRLNVRIKD LLGRMTLEEK IGQMVQIERV 60 NASTEVMKKY FIGSVLSGGG SVPSKQASAQ DWINMVNEIQ KGALSTRLGI PMIYGIDAVH 120 GHNNVYNATI FPHNIGLGAT RDPQLLKRIG VASAREIRAT GIPYAFAPCV AVCRDPRWGR 180 CYESYGEDPK IVQEMTEIIP GLQGEIPPNS RKGVPYVAGK ENVVACAKHY VGDGGTTKGI 240 DENNTVIDRH GLLSIHMPGY YHSIIKGVAT IMVSYSSWNG EKMHANKNLV TDFLKNTLHF 300 QGFVISDWEA IDRITDPPHA NYTYSILASI TAGLDMIMIP YNYPEFIDGL TNLVKSNYIP 360 ISRIDDAVKR ILRVKFVMGL FENPIADLSL VNELGKQEHR ELAREAVRKS LVLLKNGKSA 420 DKPLLPLEKK TQKILVAGSH ANNLGYQCGG WTIEWQGLSG NNLTSGTTVL DAIKDTVDPT 480 TEVIFNENPD KKSLQSDTFS YAIVVVGEHP YAELNGDSLN LTIPDPGPNT ITNVCGVIKC 540 AVVIISGRPV VIQPYVDSID ALVAAWLPGT EGKGITDVLF GDYGFTGKLS QTWFKTVDQL 600 PMNFGNPNYD PLFPFGHGLT TQPIKS* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03080 | PLN03080 | 2.0e-36 | 107 | 611 | 566 | + Probable beta-xylosidase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 4.0e-51 | 411 | 620 | 228 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 2.0e-79 | 38 | 620 | 654 | + beta-D-glucoside glucohydrolase; Provisional | ||
COG1472 | BglX | 3.0e-89 | 45 | 453 | 416 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 3.0e-93 | 46 | 374 | 333 | + Glycosyl hydrolase family 3 N terminal domain. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK95015.1 | 0 | 5 | 626 | 6 | 625 | unknown [Populus trichocarpa] |
EMBL | CBI39076.1 | 0 | 25 | 626 | 26 | 635 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002266470.1 | 0 | 25 | 626 | 26 | 627 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002319151.1 | 0 | 27 | 626 | 3 | 602 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002325849.1 | 0 | 12 | 626 | 3 | 612 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1j8v_A | 0 | 27 | 625 | 5 | 603 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
PDB | 1iex_A | 0 | 27 | 625 | 5 | 603 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
PDB | 1iew_A | 0 | 27 | 625 | 5 | 603 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
PDB | 1iev_A | 0 | 27 | 625 | 5 | 603 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
PDB | 1ieq_A | 0 | 27 | 625 | 5 | 603 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |