| Basic Information | |
|---|---|
| Species | Cucumis sativus |
| Cazyme ID | Cucsa.365480.1 |
| Family | GH5 |
| Protein Properties | Length: 540 Molecular Weight: 60636.4 Isoelectric Point: 4.8705 |
| Chromosome | Chromosome/Scaffold: 03611 Start: 3281685 End: 3283533 |
| Description | Cellulase (glycosyl hydrolase family 5) protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH5 | 37 | 351 | 1.90001e-40 |
| SQSGKRVKLVCVNWPSHTQSMLIEGLNHRPLKELADEAIKLRFNCVRLTYATHMFTRYANRTVEENFDLLDLEQAKAGLAQYNAFVLNKTIAEAYEAVVD VLGASGLMVIADNHMSQPRWCCSLDDGNGFFGNRYFDPQEWLQGLSLVAQRFNNKSTVVGMSLRNELRGMMENANDWNNYVTQGVTTIHKINPAVLVIVS GLNYDNDLRCLKDKPLNVSTLDNKLAFEVHLYSFSGDSESKFVQQPLNNICAKIMHEFIDHAEFVIEGPNPFPLFVSEYGYDQREVDDAENRFMSCFTAH LAQKDLDWALWTWQG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 540 Download |
| MERTIQVILL LALVSVFSSF SAYSLPLSTH GRWIIDSQSG KRVKLVCVNW PSHTQSMLIE 60 GLNHRPLKEL ADEAIKLRFN CVRLTYATHM FTRYANRTVE ENFDLLDLEQ AKAGLAQYNA 120 FVLNKTIAEA YEAVVDVLGA SGLMVIADNH MSQPRWCCSL DDGNGFFGNR YFDPQEWLQG 180 LSLVAQRFNN KSTVVGMSLR NELRGMMENA NDWNNYVTQG VTTIHKINPA VLVIVSGLNY 240 DNDLRCLKDK PLNVSTLDNK LAFEVHLYSF SGDSESKFVQ QPLNNICAKI MHEFIDHAEF 300 VIEGPNPFPL FVSEYGYDQR EVDDAENRFM SCFTAHLAQK DLDWALWTWQ GSYYYREGQA 360 ELAETFGVLD SNWTQIKNPN FVQKFQLLQT MLQDPNSNAS FSYVIYHVQS GQCIEVSNDN 420 KEIFLTNCST SSRWSHDNDS TPIKMSSTGL CLKASGEGLE ASLSTDCVGK QSLWSAISNS 480 NLHLGTVTED GKSLCLQIIE SSNSSKIVTN SCICTANDPT CLQDTQSQWF ELVATNTLL* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00652 | Ricin_B_lectin | 0.0009 | 410 | 512 | 111 | + Ricin-type beta-trefoil lectin domain. | ||
| smart00458 | RICIN | 5.0e-5 | 405 | 517 | 118 | + Ricin-type beta-trefoil. Carbohydrate-binding domain formed from presumed gene triplication. | ||
| pfam00150 | Cellulase | 7.0e-15 | 123 | 349 | 237 | + Cellulase (glycosyl hydrolase family 5). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI34404.1 | 0 | 2 | 536 | 20 | 559 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002272422.1 | 0 | 3 | 536 | 87 | 613 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002272534.1 | 0 | 2 | 536 | 4 | 543 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002509877.1 | 0 | 5 | 538 | 2 | 547 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| RefSeq | XP_002509879.1 | 0 | 32 | 536 | 32 | 534 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1vrx_B | 0.0000000000005 | 29 | 376 | 8 | 339 | A Chain A, Endocellulase E1 From Acidothermus Cellulolyticus Mutant Y245g |
| PDB | 1vrx_A | 0.0000000000005 | 29 | 376 | 8 | 339 | A Chain A, Endocellulase E1 From Acidothermus Cellulolyticus Mutant Y245g |
| PDB | 1ece_B | 0.0000000000009 | 29 | 376 | 8 | 339 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |
| PDB | 1ece_A | 0.0000000000009 | 29 | 376 | 8 | 339 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |
| PDB | 3qhm_C | 0.00000007 | 4 | 376 | 14 | 397 | A Chain A, Crystal Analysis Of The Complex Structure, E342a-Cellotetraose, Of Endocellulase From Pyrococcus Horikoshii |
