| Basic Information | |
|---|---|
| Species | Cucumis sativus |
| Cazyme ID | Cucsa.367020.1 |
| Family | CBM43 |
| Protein Properties | Length: 477 Molecular Weight: 53023.2 Isoelectric Point: 6.3203 |
| Chromosome | Chromosome/Scaffold: 03625 Start: 479522 End: 482153 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CBM43 | 372 | 452 | 1.3e-22 |
| WCVVKNSVKDLGTISSQIDYACSMSDCTSLGYGSSCNNLNSRGNISYAYNMYFQMQDQSVEACVFGESAEIVTRNASVGNC | |||
| GH17 | 30 | 349 | 0 |
| LGANWGTMASHPLNPNIVVNLLEDNGIKKVKLFDSDSWTVSALAGSKIETIVGIPNDQLESLASDYNHAKDWVKENVTAHIYDGGVNIRYVAVGNEPFLT AYNGTYIKLTFPAMQNIQKALDEAGYSKKIKVTCPLNADVYESATNQPSDGQFRSDILDEMKDIVRFLSRNDAAFMVNIYPFLSLYLNSDFPVDFAFFDE NGKSINDKGKKYTNVFDANFDTLVWSLKKIGLGDLKIIVGEVGWPTDGNKFATVELAKRFYDGLLKKLASKKGTPMRPNEKLEVYLFGLLDEDLKSIQPG FFERHWGLFRYDGKPKFSLD | |||
| Full Sequence |
|---|
| Protein Sequence Length: 477 Download |
| MTGATFAIAV TWTVLIVVTT TITSVVQAHL GANWGTMASH PLNPNIVVNL LEDNGIKKVK 60 LFDSDSWTVS ALAGSKIETI VGIPNDQLES LASDYNHAKD WVKENVTAHI YDGGVNIRYV 120 AVGNEPFLTA YNGTYIKLTF PAMQNIQKAL DEAGYSKKIK VTCPLNADVY ESATNQPSDG 180 QFRSDILDEM KDIVRFLSRN DAAFMVNIYP FLSLYLNSDF PVDFAFFDEN GKSINDKGKK 240 YTNVFDANFD TLVWSLKKIG LGDLKIIVGE VGWPTDGNKF ATVELAKRFY DGLLKKLASK 300 KGTPMRPNEK LEVYLFGLLD EDLKSIQPGF FERHWGLFRY DGKPKFSLDL TGKGNDKRLV 360 AAKGVQYLEH KWCVVKNSVK DLGTISSQID YACSMSDCTS LGYGSSCNNL NSRGNISYAY 420 NMYFQMQDQS VEACVFGESA EIVTRNASVG NCLFPIQIDS IGQRHSYNYV HFPNFI* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 0.0006 | 218 | 341 | 130 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 5.0e-13 | 371 | 440 | 79 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 6.0e-26 | 371 | 454 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 6.0e-79 | 30 | 349 | 321 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN62816.1 | 0 | 7 | 464 | 4 | 460 | hypothetical protein [Vitis vinifera] |
| RefSeq | NP_201284.1 | 0 | 7 | 460 | 6 | 457 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | XP_002275701.1 | 0 | 7 | 464 | 4 | 460 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002310612.1 | 0 | 18 | 469 | 20 | 469 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002530257.1 | 0 | 15 | 464 | 14 | 461 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3ur8_B | 0 | 30 | 350 | 3 | 314 | A Chain A, Crystal Structure Of A Leucine Rich Hypothetical Protein (Bacova_01565) From Bacteroides Ovatus Atcc 8483 At 2.05 A Resolution |
| PDB | 3ur8_A | 0 | 30 | 350 | 3 | 314 | A Chain A, Crystal Structure Of A Leucine Rich Hypothetical Protein (Bacova_01565) From Bacteroides Ovatus Atcc 8483 At 2.05 A Resolution |
| PDB | 3ur7_B | 0 | 30 | 350 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 3ur7_A | 0 | 30 | 350 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 4gzj_A | 0 | 30 | 350 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
