Basic Information | |
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Species | Cucumis sativus |
Cazyme ID | Cucsa.367120.1 |
Family | CBM43 |
Protein Properties | Length: 389 Molecular Weight: 42873 Isoelectric Point: 6.5046 |
Chromosome | Chromosome/Scaffold: 03625 Start: 557861 End: 559105 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 311 | 388 | 3.6e-32 |
WCVAKPNVPAEILQQAMDYACGDGGADCREISAEGSCFHPDSLVAHASYAFNSYWQKNKRSGGTCSFGGTAMIISSDP |
Full Sequence |
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Protein Sequence Length: 389 Download |
MVKKMKFFSP FFLLFFFFFF FFLLLGLTTA GQESIQFVKL DEIASSGVFP AMSASELPVA 60 VSVTDVELPE VSSSVLMAES WLRTFVLAHY PSTKITTIVV GNSSLCSNKN LDTNNLHIVL 120 LSMKNLFYSL TRWGLENQIK VSTLFPKDCF HSQEESIQNM VKLVIEFIQS TNSTLSLKLP 180 ENVISLHETE SFISTHTNKF GFLKLKKVNL LTSVSKQRNP TNRKLSSFME LKEYEPFFTS 240 EPPLPSDLAT PPLPPESQIA SPPHWSFASA PESPPFVVPA SPPMGFTLPP CNPNQNAGAP 300 FPQTGGVQKL WCVAKPNVPA EILQQAMDYA CGDGGADCRE ISAEGSCFHP DSLVAHASYA 360 FNSYWQKNKR SGGTCSFGGT AMIISSDPX |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00332 | Glyco_hydro_17 | 4.0e-9 | 32 | 175 | 160 | + Glycosyl hydrolases family 17. | ||
pfam07983 | X8 | 3.0e-27 | 310 | 382 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 3.0e-38 | 310 | 388 | 79 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACU22745.1 | 0 | 198 | 388 | 2 | 196 | unknown [Glycine max] |
EMBL | CBI33700.1 | 0 | 14 | 388 | 7 | 347 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_201547.1 | 0 | 15 | 388 | 4 | 370 | glycosyl hydrolase family protein 17 [Arabidopsis thaliana] |
RefSeq | XP_002279597.1 | 0 | 14 | 388 | 7 | 403 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002525263.1 | 0 | 28 | 388 | 20 | 412 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 0.000000000003 | 300 | 388 | 5 | 89 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 2cyg_A | 0.000001 | 51 | 143 | 42 | 129 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_B | 0.00007 | 46 | 143 | 39 | 133 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_A | 0.00007 | 46 | 143 | 39 | 133 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur7_B | 0.00007 | 46 | 143 | 39 | 133 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |