Basic Information | |
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Species | Cucumis sativus |
Cazyme ID | Cucsa.370570.1 |
Family | GH35 |
Protein Properties | Length: 763 Molecular Weight: 86063.3 Isoelectric Point: 8.2739 |
Chromosome | Chromosome/Scaffold: 03678 Start: 259105 End: 263548 |
Description | glycosyl hydrolase family 35 protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 40 | 344 | 0 |
LIINGKRELLFSGSIHYTRSTPEMWSDILDKARRGGLNVIQTYVFWNIHEPVEGQFNFEGNYDLVKFIKLIGEKQMYVTLRVGPFIQAEWNHGGLPYWLR EKPNIIFRSYNSQFKHYMKKYVAMIVDMMKENKLFASQGGPIVLAQIENEYNHVQLAYDELGVQYVQWAANMAVGLGVGVPWIMCKQKDAPDPVINTCNG RHCGDTFTGPNKPYKPALWTENWTAQYRVFGDPPSQRAAEDIAFSVARFFSKNGSLVNYYMYHGGTNFGRTSAVFTTTRYYDEAPLDEFGLQREPKWGHL RDVHK |
Full Sequence |
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Protein Sequence Length: 763 Download |
MAVHREILLL FILSIVLPFH TTSHAHDGNT TGVSYDSRSL IINGKRELLF SGSIHYTRST 60 PEMWSDILDK ARRGGLNVIQ TYVFWNIHEP VEGQFNFEGN YDLVKFIKLI GEKQMYVTLR 120 VGPFIQAEWN HGGLPYWLRE KPNIIFRSYN SQFKHYMKKY VAMIVDMMKE NKLFASQGGP 180 IVLAQIENEY NHVQLAYDEL GVQYVQWAAN MAVGLGVGVP WIMCKQKDAP DPVINTCNGR 240 HCGDTFTGPN KPYKPALWTE NWTAQYRVFG DPPSQRAAED IAFSVARFFS KNGSLVNYYM 300 YHGGTNFGRT SAVFTTTRYY DEAPLDEFGL QREPKWGHLR DVHKALNLCK KPLLWGTPGI 360 QVIGKGLEAR FYEKPGTNIC AAFLANNDTK SAQTINFRGR EFLLPPRSIS ILPDCKTVVF 420 NTETHSTNNS IELDKEDVSK RPDILPVLRI ASLGHAMLVF VNGEYIGTAH GSHEEKNFVF 480 QGSVPFKAGV NNIALLGILV GLPDSGAYME HRFAGPRSIT ILGLNTGTLD ISKNGWGHQR 540 RCTNVMNKHN RLTLSYHLLL LQTYFDAPEG NDPVAIRMNG MGKGQIWVNG KSIGRYWMSY 600 LSPLKLSTQS EYHIPRSFIK PSENLLVILE EENVTPEKVE ILLVNRDTIC SFITQYHPPN 660 VKSWERKDKQ FRAVVDDVKT GAHLRCPHDK KITNIEFASF GDPSGVCGNF EHGKCHSSSD 720 TKKLVEQHCL GKENCSVPMD AFDNFKNECD SKTLAIQAKC SE* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 1.0e-8 | 62 | 190 | 143 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
pfam02140 | Gal_Lectin | 1.0e-14 | 684 | 760 | 83 | + Galactose binding lectin domain. | ||
COG1874 | LacA | 8.0e-21 | 33 | 190 | 165 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 2.0e-152 | 39 | 346 | 322 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 5 | 761 | 848 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAS76480.1 | 0 | 1 | 761 | 1 | 843 | beta-galactosidase [Gossypium hirsutum] |
GenBank | ACC60982.1 | 0 | 32 | 762 | 27 | 828 | beta-galactosidase 2 precursor [Petunia x hybrida] |
RefSeq | XP_002278545.1 | 0 | 1 | 760 | 1 | 829 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002306183.1 | 0 | 25 | 761 | 23 | 827 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002312963.1 | 0 | 25 | 761 | 23 | 826 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3thd_D | 8e-39 | 33 | 342 | 11 | 330 | A Chain A, Crystal Structure Of Trehalose Synthase Tret From P. Horikoshii (Seleno Derivative) |
PDB | 3thd_D | 0.0003 | 475 | 658 | 433 | 630 | A Chain A, Crystal Structure Of Trehalose Synthase Tret From P. Horikoshii (Seleno Derivative) |
PDB | 3thd_C | 8e-39 | 33 | 342 | 11 | 330 | A Chain A, Crystal Structure Of Trehalose Synthase Tret From P. Horikoshii (Seleno Derivative) |
PDB | 3thd_C | 0.0003 | 475 | 658 | 433 | 630 | A Chain A, Crystal Structure Of Trehalose Synthase Tret From P. Horikoshii (Seleno Derivative) |
PDB | 3thd_B | 8e-39 | 33 | 342 | 11 | 330 | A Chain A, Crystal Structure Of Trehalose Synthase Tret From P. Horikoshii (Seleno Derivative) |