| Basic Information | |
|---|---|
| Species | Cucumis sativus |
| Cazyme ID | Cucsa.383110.1 |
| Family | GH14 |
| Protein Properties | Length: 541 Molecular Weight: 60691.8 Isoelectric Point: 8.2499 |
| Chromosome | Chromosome/Scaffold: 03882 Start: 39965 End: 43500 |
| Description | beta-amylase 1 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH14 | 93 | 503 | 0 |
| FVMMALDSVTMGNKVNRRKAMEVSFQAMKGAGVEGVMVDVWWGLVEKERPGEYNFGGYEDLLGMAAKYGLKVQTVMSFHQCGGNVGDSCTIPLPKWVVEE MEKDPDLAYTDQWGRRNLEYLSLGCDNLPVLKGRTPVQCYADFMRAFKHNFNHLLGNTIVEIQVGMGPAGELRYPSYPEQNGTWRFPGIGAFQCFDKYML SSLKAAANVAGKPEWGSTGPTDAGHYNNWPEDTQFFKKEGGGWNSTYGEFFLSWYSQILLDHGDAILSHASSIFKPSSVKISVKIAGIHWHYGTRSHAPE LTAGYYNTRYRDGYTPIARMLARHGAIFNFTCIEMHDHEQPQNAQCSPEKLVRQVKLATQKAHVPLAGENALPRYDEYAYEQIVRASREMCAFTYLRMNT QLFEEENWRRF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 541 Download |
| MALRSIHQIG TLFPATNCND HSSHSRVPTS TAAVRAVPTA AILRSRFSNR EREEVMVSSL 60 DRVGRSFSLS CSASTAAVEE EEKGGYRSGV GVFVMMALDS VTMGNKVNRR KAMEVSFQAM 120 KGAGVEGVMV DVWWGLVEKE RPGEYNFGGY EDLLGMAAKY GLKVQTVMSF HQCGGNVGDS 180 CTIPLPKWVV EEMEKDPDLA YTDQWGRRNL EYLSLGCDNL PVLKGRTPVQ CYADFMRAFK 240 HNFNHLLGNT IVEIQVGMGP AGELRYPSYP EQNGTWRFPG IGAFQCFDKY MLSSLKAAAN 300 VAGKPEWGST GPTDAGHYNN WPEDTQFFKK EGGGWNSTYG EFFLSWYSQI LLDHGDAILS 360 HASSIFKPSS VKISVKIAGI HWHYGTRSHA PELTAGYYNT RYRDGYTPIA RMLARHGAIF 420 NFTCIEMHDH EQPQNAQCSP EKLVRQVKLA TQKAHVPLAG ENALPRYDEY AYEQIVRASR 480 EMCAFTYLRM NTQLFEEENW RRFVGFVQKM KEGKNGHRSW DEKKKQQVEK LVPNLPNGSK 540 * 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam01373 | Glyco_hydro_14 | 5.0e-134 | 93 | 506 | 427 | + Glycosyl hydrolase family 14. This family are beta amylases. | ||
| PLN02161 | PLN02161 | 7.0e-143 | 65 | 510 | 465 | + beta-amylase | ||
| PLN02801 | PLN02801 | 9.0e-177 | 76 | 510 | 450 | + beta-amylase | ||
| PLN00197 | PLN00197 | 0 | 1 | 530 | 561 | + beta-amylase; Provisional | ||
| PLN02803 | PLN02803 | 0 | 87 | 518 | 437 | + beta-amylase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000272 | polysaccharide catabolic process |
| GO:0016161 | beta-amylase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAY89374.1 | 0 | 1 | 532 | 1 | 560 | beta-amylase 1 [Nicotiana langsdorffii x Nicotiana sanderae] |
| EMBL | CAN71375.1 | 0 | 7 | 518 | 5 | 541 | hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002285569.1 | 0 | 1 | 518 | 1 | 544 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002314522.1 | 0 | 89 | 526 | 6 | 453 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002518196.1 | 0 | 1 | 530 | 1 | 552 | Beta-amylase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1b1y_A | 0 | 83 | 510 | 2 | 435 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
| PDB | 1ukp_D | 0 | 90 | 536 | 12 | 466 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| PDB | 1ukp_C | 0 | 90 | 536 | 12 | 466 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| PDB | 1ukp_B | 0 | 90 | 536 | 12 | 466 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| PDB | 1ukp_A | 0 | 90 | 536 | 12 | 466 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO779314 | 389 | 148 | 526 | 0 |
| JG477365 | 286 | 178 | 463 | 0 |
| HO826564 | 377 | 146 | 513 | 0 |
| DT555349 | 320 | 177 | 486 | 0 |
| BU103692 | 429 | 87 | 513 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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