Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.A01020.3 |
Family | CBM43 |
Protein Properties | Length: 133 Molecular Weight: 14244.1 Isoelectric Point: 6.7667 |
Chromosome | Chromosome/Scaffold: 1 Start: 15849509 End: 15850662 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 46 | 128 | 9.2e-30 |
WCIAKPSTDNDRLHHNIDYSCRLSGVNCELIQVGGSCFQPDNAVSHASVAMNLYYKAAGKHHWDCHFNGSAIIVTADPSIGNC |
Full Sequence |
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Protein Sequence Length: 133 Download |
MAATRKSITL LPIALAILLS VTARIDSRTF DNEGKPQDAN ETGAAWCIAK PSTDNDRLHH 60 NIDYSCRLSG VNCELIQVGG SCFQPDNAVS HASVAMNLYY KAAGKHHWDC HFNGSAIIVT 120 ADPSIGNCIY PV* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 3.0e-13 | 46 | 117 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 2.0e-29 | 46 | 130 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAT41831.1 | 1e-31 | 35 | 130 | 23 | 116 | At2g43670 [Arabidopsis thaliana] |
RefSeq | NP_181895.2 | 1e-31 | 35 | 130 | 24 | 117 | glycosyl hydrolase family protein 17 [Arabidopsis thaliana] |
RefSeq | XP_002273170.1 | 5.99756e-43 | 1 | 132 | 1 | 132 | PREDICTED: similar to At2g43670 [Vitis vinifera] |
RefSeq | XP_002320265.1 | 1e-36 | 39 | 132 | 41 | 134 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002515203.1 | 4e-37 | 1 | 123 | 1 | 129 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 7e-24 | 36 | 131 | 3 | 97 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |