Basic Information | |
---|---|
Species | Eucalyptus grandis |
Cazyme ID | Eucgr.A01095.1 |
Family | CBM43 |
Protein Properties | Length: 478 Molecular Weight: 51604.4 Isoelectric Point: 6.9355 |
Chromosome | Chromosome/Scaffold: 1 Start: 16730476 End: 16733191 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CBM43 | 389 | 471 | 2.5e-34 |
WCVAKGEAGKEKLQAALDFACGEGGADCRPIQRGSTCYDPNTLEAHASYAFNSYYQMKGRAFWTCDFGGAASIVSQPPKYGKC | |||
GH17 | 27 | 343 | 0 |
IGVNYGRVADNLPPATKVVQLLKSQGVQKVKIYDADPAVLHAFAGTGIRLTVDLPNEKLFAAARSLSFSLDWVQQNVADYPTTQIEAIAVGNEVFVDTHN TTRFLVPAMKNIHTALVKHNLHNAIKISSPIALSALQASYPSSAGSFRPELIEPVFKPMLEFLRQTGSYLMVNAYPFFAYESNSDVISLDYALFRENPGV VDAGNGLRYFNLFDAQIDAVFAAMSALKYDDIKMVVTETGWPSKGDENEVGASKDNAAAYNGNLVRRILTGGGTPLRRQADLTVYLFALFNENKKPGPSS EQNYGLFYPNQDKVYDV |
Full Sequence |
---|
Protein Sequence Length: 478 Download |
MEHLPLAFFF LLLSVLSLAV WTDGGSIGVN YGRVADNLPP ATKVVQLLKS QGVQKVKIYD 60 ADPAVLHAFA GTGIRLTVDL PNEKLFAAAR SLSFSLDWVQ QNVADYPTTQ IEAIAVGNEV 120 FVDTHNTTRF LVPAMKNIHT ALVKHNLHNA IKISSPIALS ALQASYPSSA GSFRPELIEP 180 VFKPMLEFLR QTGSYLMVNA YPFFAYESNS DVISLDYALF RENPGVVDAG NGLRYFNLFD 240 AQIDAVFAAM SALKYDDIKM VVTETGWPSK GDENEVGASK DNAAAYNGNL VRRILTGGGT 300 PLRRQADLTV YLFALFNENK KPGPSSEQNY GLFYPNQDKV YDVPLTVEGL KNYHDTGKSA 360 PAGGGQRGVA APVKGGRGGV SKSSSANTWC VAKGEAGKEK LQAALDFACG EGGADCRPIQ 420 RGSTCYDPNT LEAHASYAFN SYYQMKGRAF WTCDFGGAAS IVSQPPKYGK CDFPTGY* 480 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 4.0e-7 | 198 | 336 | 149 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 2.0e-24 | 388 | 460 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 7.0e-41 | 388 | 473 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 7.0e-102 | 27 | 343 | 318 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_178637.2 | 0 | 23 | 477 | 21 | 472 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002274828.1 | 0 | 1 | 477 | 1 | 471 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002302861.1 | 0 | 1 | 477 | 1 | 470 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002333242.1 | 0 | 18 | 477 | 15 | 470 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002525335.1 | 0 | 23 | 466 | 20 | 458 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 27 | 343 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ghs_B | 0 | 27 | 343 | 1 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 27 | 343 | 1 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghr_A | 0 | 27 | 343 | 1 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1aq0_B | 0 | 27 | 343 | 1 | 304 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |