Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.A01979.1 |
Family | CBM43 |
Protein Properties | Length: 250 Molecular Weight: 25632.8 Isoelectric Point: 6.7114 |
Chromosome | Chromosome/Scaffold: 1 Start: 30487748 End: 30490939 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 110 | 192 | 9e-35 |
WCIASQSVSQTALQVALDYACGYGGADCSGIQPGGSCYYPNTVHDHASYAFNKYYQKNPVPTSCSFGGTAVVTSTDPSTSTCQ |
Full Sequence |
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Protein Sequence Length: 250 Download |
MGGKRVRYAI ILLCHLLLCS GSGSLATRKE AVGYANEIAQ GKKYPTSSPS DQKDITDPVT 60 TVPTMNPAPF ASADPVVNPT SNPELAPPAV ISPITYPAMA TPPPSLSSSW CIASQSVSQT 120 ALQVALDYAC GYGGADCSGI QPGGSCYYPN TVHDHASYAF NKYYQKNPVP TSCSFGGTAV 180 VTSTDPSTST CQFQSTSTAS SILNTTNSSG ATVFGAVPSG PPASSASQLS CIVSLVMTLS 240 WLSFASGIY* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 3.0e-23 | 109 | 180 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 2.0e-34 | 109 | 186 | 79 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EEC79758.1 | 0 | 52 | 222 | 53 | 220 | hypothetical protein OsI_21142 [Oryza sativa Indica Group] |
GenBank | EEE64827.1 | 0 | 52 | 222 | 53 | 220 | hypothetical protein OsJ_19684 [Oryza sativa Japonica Group] |
RefSeq | NP_001031450.1 | 9.80909e-45 | 109 | 244 | 81 | 216 | unknown protein [Arabidopsis thaliana] |
RefSeq | XP_002283721.1 | 0 | 1 | 215 | 1 | 204 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002441577.1 | 0 | 49 | 206 | 32 | 170 | hypothetical protein SORBIDRAFT_09g029700 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 5e-18 | 98 | 198 | 1 | 101 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |