Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.A02153.1 |
Family | GT47 |
Protein Properties | Length: 511 Molecular Weight: 57900.8 Isoelectric Point: 9.3204 |
Chromosome | Chromosome/Scaffold: 1 Start: 32189270 End: 32193691 |
Description | exostosin family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 117 | 434 | 0 |
KAALKVYMYDLPPEFHFGLLDWKGEGKGVWPDIRTKIPDYPGGLNLQHSIEYWLTLDLLSSEFTNSSGGRSAVRVHNSNEADVIFVPFFSSLSYNRFSKG NPHQKKSKNKLLQEKLVSYLARQPEWKRSGGRDHVVVAHHPNSMLDARMKLWPAMFILADFGRYPPNIANVDKDVIAPYKHVVRNYADDNSGFDSRPTLL YFQGAIYRKDGGYVRQELFYLLKDEKDVHFSFGSVQKDGIRKATQGMRSSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPYEDVLDYSQFCIFV RTSDAIKKNFLINFIRSI |
Full Sequence |
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Protein Sequence Length: 511 Download |
MAERNSPALG ILSRKSLFSL FTATSLVFLL SWLFVFQSAG GRPRFIDHSL LPNSKLLATL 60 DAAAAANREG RSENEVGPSV GNRSILMDGE EEAGEAPRAK ADAKCGSPDD DDSNYNKAAL 120 KVYMYDLPPE FHFGLLDWKG EGKGVWPDIR TKIPDYPGGL NLQHSIEYWL TLDLLSSEFT 180 NSSGGRSAVR VHNSNEADVI FVPFFSSLSY NRFSKGNPHQ KKSKNKLLQE KLVSYLARQP 240 EWKRSGGRDH VVVAHHPNSM LDARMKLWPA MFILADFGRY PPNIANVDKD VIAPYKHVVR 300 NYADDNSGFD SRPTLLYFQG AIYRKDGGYV RQELFYLLKD EKDVHFSFGS VQKDGIRKAT 360 QGMRSSKFCL NIAGDTPSSN RLFDAIASHC VPVIISDEIE LPYEDVLDYS QFCIFVRTSD 420 AIKKNFLINF IRSIGKDEWT RMWQRLKEIN NFYEFQYPSK DGDAVQMIWQ AIARKVPSIR 480 MKLHKSRRFA HHLGHTESGL ISFKSPKNFW * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 6.0e-58 | 117 | 434 | 328 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAX33321.1 | 0 | 1 | 510 | 1 | 509 | secondary cell wall-related glycosyltransferase family 47 [Populus tremula x Populus tremuloides] |
EMBL | CAN68950.1 | 0 | 1 | 510 | 1 | 488 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002268382.1 | 0 | 1 | 510 | 1 | 488 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002319201.1 | 0 | 1 | 490 | 3 | 450 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002530948.1 | 0 | 1 | 506 | 1 | 496 | catalytic, putative [Ricinus communis] |