Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.A02396.1 |
Family | GT47 |
Protein Properties | Length: 794 Molecular Weight: 89496.3 Isoelectric Point: 6.3663 |
Chromosome | Chromosome/Scaffold: 1 Start: 34680942 End: 34689486 |
Description | exostosin family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 347 | 699 | 0 |
KRPLIYVYDLPPEFNSLLLEGRHFKLECVNRIYDDRNATLWTEQLYGSQMALYESILASPHRTLNGEEADFFFVPVLDSCIITRADDVPHLSMQDHMGLR SSLTLDFYKKAHNHIVSQYPFWNRSSGRDHLWFFSWDEGACYAPKEIWNSMMLVHWGNTNSKHNHSTTAYWADDWDKISLDRRGDHPCFDPDKDLVLPAW KIPDANAVKLNLWARPYEKRKKLFYFNGNLGPAYANGRPEVTYSMGIRQKLAEEFGSSPNKKGKLGRQHAKDVIVTPLRSENYHEDLASSIFCGVLPGDG WSGRMEDSILQGCIPVVIQDGIYLPYENVLNYDSFAVRLREDEIPDLVKILRG |
Full Sequence |
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Protein Sequence Length: 794 Download |
MFHIEKVKFS WSLAGGIAST VALISLVHLF VYPVVPSLDY LNAQKVQNPC LPLNGSSEGG 60 KSNGQAIRSR VDLDNQFPAD SHNAVVYRGA PWKARIGRWL SGCDSVTEEV NVVEVIGGLS 120 CKDDCSGQGI CNHELGQCRC FHGFSGEGCS EKLHLDCNYP ASSELPYGRW VVSICSAHCD 180 TTRAMCFCGE GTKYPNRPVA EACGFQVKLP SEDGGPKVTD WAKADLENIF TMNGSMPGWC 240 NVDPADAYSS KVHFKEECDC KYDGLLGSFC EVPVQCTCIN QCSGHGYCRG GFCQCKNGWY 300 GADCSIPSVL SSVGEWPRWL RPAQIEVPTN ENLTGPLVSL NTSLKRKRPL IYVYDLPPEF 360 NSLLLEGRHF KLECVNRIYD DRNATLWTEQ LYGSQMALYE SILASPHRTL NGEEADFFFV 420 PVLDSCIITR ADDVPHLSMQ DHMGLRSSLT LDFYKKAHNH IVSQYPFWNR SSGRDHLWFF 480 SWDEGACYAP KEIWNSMMLV HWGNTNSKHN HSTTAYWADD WDKISLDRRG DHPCFDPDKD 540 LVLPAWKIPD ANAVKLNLWA RPYEKRKKLF YFNGNLGPAY ANGRPEVTYS MGIRQKLAEE 600 FGSSPNKKGK LGRQHAKDVI VTPLRSENYH EDLASSIFCG VLPGDGWSGR MEDSILQGCI 660 PVVIQDGIYL PYENVLNYDS FAVRLREDEI PDLVKILRGF NETEVKFKQA NVQKIWQRFL 720 YRDSILLEAE RQRNALGRVD NWASAFLQFS EDDVFATFMQ VLHYKLHNDP WRQQVGPQNK 780 ESGLPQECLM KAT* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07974 | EGF_2 | 0.0001 | 276 | 304 | 31 | + EGF-like domain. This family contains EGF domains found in a variety of extracellular proteins. | ||
pfam03016 | Exostosin | 8.0e-69 | 345 | 700 | 357 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0005515 | protein binding |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN80640.1 | 0 | 2 | 783 | 3 | 809 | hypothetical protein [Vitis vinifera] |
EMBL | CBI29877.1 | 0 | 2 | 792 | 31 | 821 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_191322.3 | 0 | 1 | 793 | 1 | 793 | exostosin family protein [Arabidopsis thaliana] |
RefSeq | XP_002277596.1 | 0 | 2 | 792 | 3 | 793 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002308967.1 | 0 | 1 | 793 | 1 | 793 | predicted protein [Populus trichocarpa] |