| Basic Information | |
|---|---|
| Species | Eucalyptus grandis |
| Cazyme ID | Eucgr.A02536.1 |
| Family | AA7 |
| Protein Properties | Length: 642 Molecular Weight: 68914.7 Isoelectric Point: 6.9105 |
| Chromosome | Chromosome/Scaffold: 1 Start: 35923559 End: 35935869 |
| Description | FAD-linked oxidases family protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| AA7 | 218 | 414 | 8.8e-27 |
| NIPDVIVFPRSEEEVSKIVKSCNEYKVPIMPYGGATSIEGHTLSPNGGVCIDMTLMKTVKALHVEDMDVVVEPGIGWMELNEYLEPYGLFFPLDPGPGAT IGGMCATRCSGSLAVRYGTMRDNVISLKVVLANGDVVKTASRARKSAAGYDLTRLIIGSEGTLGVITEVTLRLQKIPQHSVVAMCNFPSVKDAADVA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 642 Download |
| MKDWAIVSAR LICLKHVVGA TKKNGALDVS VCKVSSFIPS ASPLLPSGDA LALLPFLFSP 60 VAVMAFNSWI SRLRASSSKA ILDGLRRARA GSSRGRHSSA PAQRALAATA AGSGGSDDRR 120 FWLWSSALVP LAVAASAGSL ALRSSPEPSL CEAPGLHAGG VKLGGKGSTA YLVKGSHKEV 180 PQELIDELVA ICGENLTMDY EERFLHGKPQ HSFHKAVNIP DVIVFPRSEE EVSKIVKSCN 240 EYKVPIMPYG GATSIEGHTL SPNGGVCIDM TLMKTVKALH VEDMDVVVEP GIGWMELNEY 300 LEPYGLFFPL DPGPGATIGG MCATRCSGSL AVRYGTMRDN VISLKVVLAN GDVVKTASRA 360 RKSAAGYDLT RLIIGSEGTL GVITEVTLRL QKIPQHSVVA MCNFPSVKDA ADVAIATMHS 420 GIQVSRVELL DEVLMKAVNL ANGKNLPELP TLMFEFIGTE AYSLEQTNVV QKIVSEHNGS 480 DFVFAKDPEA KKELWKIRKE ALWACYAMEP TCEAMITDVC VPLSHLAALI ARSKQELDAS 540 QLTCTVVAHA GDGNFHTLIM FDPSKDDQRE EAEGLNHLMV HMALSMQGTC TGEHGVGTGK 600 MKYLEEELGM EALRTMKKIK QAVDPNNIMN PGKLIPPHVC F* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK11230 | PRK11230 | 1.0e-48 | 219 | 640 | 428 | + glycolate oxidase subunit GlcD; Provisional | ||
| pfam02913 | FAD-oxidase_C | 2.0e-68 | 393 | 634 | 247 | + FAD linked oxidases, C-terminal domain. This domain has a ferredoxin-like fold. | ||
| TIGR00387 | glcD | 7.0e-93 | 223 | 633 | 416 | + glycolate oxidase, subunit GlcD. This protein, the glycolate oxidase GlcD subunit, is similar in sequence to that of several D-lactate dehydrogenases, including that of E. coli. The glycolate oxidase has been found to have some D-lactate dehydrogenase activity [Energy metabolism, Other]. | ||
| COG0277 | GlcD | 6.0e-120 | 187 | 637 | 465 | + FAD/FMN-containing dehydrogenases [Energy production and conversion] | ||
| PLN02805 | PLN02805 | 0 | 146 | 641 | 496 | + D-lactate dehydrogenase [cytochrome] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0008762 | UDP-N-acetylmuramate dehydrogenase activity |
| GO:0016491 | oxidoreductase activity |
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABK24997.1 | 0 | 146 | 641 | 89 | 580 | unknown [Picea sitchensis] |
| RefSeq | NP_568170.1 | 0 | 64 | 641 | 1 | 567 | FAD linked oxidase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002267321.1 | 0 | 64 | 641 | 1 | 566 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002322755.1 | 0 | 163 | 641 | 1 | 480 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002524111.1 | 0 | 64 | 641 | 1 | 555 | d-lactate dehydrogenase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3pm9_F | 1.99965e-42 | 183 | 635 | 16 | 476 | A Chain A, Crystal Structure Of A Putative Dehydrogenase (Rpa1076) From Rhodopseudomonas Palustris Cga009 At 2.57 A Resolution |
| PDB | 3pm9_E | 1.99965e-42 | 183 | 635 | 16 | 476 | A Chain A, Crystal Structure Of A Putative Dehydrogenase (Rpa1076) From Rhodopseudomonas Palustris Cga009 At 2.57 A Resolution |
| PDB | 3pm9_D | 1.99965e-42 | 183 | 635 | 16 | 476 | A Chain A, Crystal Structure Of A Putative Dehydrogenase (Rpa1076) From Rhodopseudomonas Palustris Cga009 At 2.57 A Resolution |
| PDB | 3pm9_C | 1.99965e-42 | 183 | 635 | 16 | 476 | A Chain A, Crystal Structure Of A Putative Dehydrogenase (Rpa1076) From Rhodopseudomonas Palustris Cga009 At 2.57 A Resolution |
| PDB | 3pm9_B | 1.99965e-42 | 183 | 635 | 16 | 476 | A Chain A, Crystal Structure Of A Putative Dehydrogenase (Rpa1076) From Rhodopseudomonas Palustris Cga009 At 2.57 A Resolution |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
 | ||||
| Hit | Length | Start | End | EValue |
| EX265038 | 323 | 234 | 555 | 0 |
| DY305587 | 368 | 274 | 641 | 0 |
| EX261606 | 322 | 291 | 608 | 0 |
| DT747637 | 285 | 263 | 547 | 0 |
| EX261606 | 50 | 589 | 638 | 0.081 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
| Phylogeny |
|---|
 |