Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.A02868.1 |
Family | GT47 |
Protein Properties | Length: 517 Molecular Weight: 58561.8 Isoelectric Point: 8.8082 |
Chromosome | Chromosome/Scaffold: 1 Start: 39100369 End: 39102615 |
Description | glycosyltransferase 18 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 117 | 457 | 0 |
GSGKIYVYEVPSFFNAEILKQCDNLNPWSSRCDALANRGFGQPAAGRLAGIVPEKLAPAWFWTDQFVSEILFHNRMLKHPCRTTEPGSAAAFYIPFYAGL AVGKYLWSNSSAKERDRHCEMMLRWVQDQAPYKRSNGWDHFITMGRITWDFRRSKDQDWGSSCIYTPGMRNITRLVIERNSWDYFDVGVPYPTGFHPRSD ADVAEWQDFVRARPRPALFCFAGAKRGAIRNDFRGILLSQCRAEPDACRAVDCGGSRCANGTTEILETFLGSKFCLQPRGDSFTRRSIFDCMVAGSIPVF FWKRTAYYQYEWFLPAEPGSYSVFIDRKAVENGTSIRKVLE |
Full Sequence |
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Protein Sequence Length: 517 Download |
MLPISDQPPP EPHKKKTASD PLLVRRNSFN SLASALQPYL SLHNPRTCLF LAIVSLQILI 60 LLVARSVPLP PSFRHARRHF PAPITAAARL PSSSSSAAAA AAASPTDPPS ADHDQCGSGK 120 IYVYEVPSFF NAEILKQCDN LNPWSSRCDA LANRGFGQPA AGRLAGIVPE KLAPAWFWTD 180 QFVSEILFHN RMLKHPCRTT EPGSAAAFYI PFYAGLAVGK YLWSNSSAKE RDRHCEMMLR 240 WVQDQAPYKR SNGWDHFITM GRITWDFRRS KDQDWGSSCI YTPGMRNITR LVIERNSWDY 300 FDVGVPYPTG FHPRSDADVA EWQDFVRARP RPALFCFAGA KRGAIRNDFR GILLSQCRAE 360 PDACRAVDCG GSRCANGTTE ILETFLGSKF CLQPRGDSFT RRSIFDCMVA GSIPVFFWKR 420 TAYYQYEWFL PAEPGSYSVF IDRKAVENGT SIRKVLERYS EEDVRRMREK VIEYIPKFLY 480 AMPEDGLESV KDAFDVAIDG VLRRFKEQEE WGFKWR* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 1.0e-49 | 115 | 459 | 360 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_201028.1 | 0 | 1 | 516 | 1 | 517 | exostosin family protein [Arabidopsis thaliana] |
RefSeq | XP_002270309.1 | 0 | 1 | 515 | 1 | 489 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002318866.1 | 0 | 1 | 515 | 1 | 512 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002321855.1 | 0 | 1 | 515 | 2 | 516 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002510893.1 | 0 | 1 | 515 | 1 | 497 | Xyloglucan galactosyltransferase KATAMARI1, putative [Ricinus communis] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY290373 | 371 | 128 | 497 | 0 |
DY267021 | 349 | 150 | 497 | 0 |
EX676257 | 293 | 115 | 406 | 0 |
DY269151 | 331 | 187 | 515 | 0 |
EL434952 | 312 | 129 | 439 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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