Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.B02276.1 |
Family | GH3 |
Protein Properties | Length: 618 Molecular Weight: 66953.1 Isoelectric Point: 5.6221 |
Chromosome | Chromosome/Scaffold: 2 Start: 43924445 End: 43929366 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 96 | 331 | 0 |
LESRLGIPLIYGIDAVHGNNSIYGATIFPHNIGLGATRDAELVRRIGVATALEVRASGIPYTFAPCVAVLKDPRWGRSYESYSEDTDIVRKMTPIVAGLQ GQPPQGHPKGYPFVAGRNNVIACAKHFVGDGGTERGVNEGNTVTSYEDLERIHMAPYLDCISQGVCTVMASYSSWNGRRLHSDYFLLTEVLKDKLGFKGF VISDWEGLDRLSQPHGSNYRQSISLAVNAGIDMIMV |
Full Sequence |
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Protein Sequence Length: 618 Download |
MGSAEDARCV YKDPNAAIED RVNDLLSRMT LQEKVGQMTQ IERRVATPSV LSGLSIGSIL 60 SAGGSGPFGV IGSESSKQAL SSDWADMVDG FQKAALESRL GIPLIYGIDA VHGNNSIYGA 120 TIFPHNIGLG ATRDAELVRR IGVATALEVR ASGIPYTFAP CVAVLKDPRW GRSYESYSED 180 TDIVRKMTPI VAGLQGQPPQ GHPKGYPFVA GRNNVIACAK HFVGDGGTER GVNEGNTVTS 240 YEDLERIHMA PYLDCISQGV CTVMASYSSW NGRRLHSDYF LLTEVLKDKL GFKGFVISDW 300 EGLDRLSQPH GSNYRQSISL AVNAGIDMIM VPFRHEQFAE DLTALAESGE VPMSRIDDAV 360 QRILRVKFVS GLFEHPFSDR SLLQIVGCKS HRELAREAVR KSLVLLKNGK DPMKPFLPLD 420 KNAKKILVAG SHADDLGYQC GGWTATWHGS SGRITIGTTI LDAIKEAVGG NTEVIYEQNP 480 SPSTLASHDY TFAIVAVGEG PYAETLGDNP ELAIPFNGTD VIKSVAERIP TLVLVVSGRP 540 LVIEPHVLEK IDALVATWLP GSEGTGITDV VFADYDFEGQ LPISWFRTVE QVPMDHKANS 600 YDPLFPLGFG LKCKKEA* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03080 | PLN03080 | 5.0e-36 | 94 | 603 | 562 | + Probable beta-xylosidase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 2.0e-47 | 403 | 611 | 229 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
pfam00933 | Glyco_hydro_3 | 5.0e-83 | 30 | 366 | 341 | + Glycosyl hydrolase family 3 N terminal domain. | ||
COG1472 | BglX | 6.0e-88 | 29 | 468 | 450 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
PRK15098 | PRK15098 | 2.0e-88 | 14 | 611 | 669 | + beta-D-glucoside glucohydrolase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN81230.1 | 0 | 9 | 616 | 3 | 635 | hypothetical protein [Vitis vinifera] |
EMBL | CBI16000.1 | 0 | 29 | 616 | 1 | 582 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002279757.1 | 0 | 5 | 616 | 111 | 716 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002313393.1 | 0 | 5 | 614 | 2 | 597 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002525596.1 | 0 | 9 | 611 | 4 | 598 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1j8v_A | 0 | 10 | 611 | 4 | 597 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
PDB | 1iex_A | 0 | 10 | 611 | 4 | 597 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
PDB | 1iew_A | 0 | 10 | 611 | 4 | 597 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
PDB | 1iev_A | 0 | 10 | 611 | 4 | 597 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
PDB | 1ieq_A | 0 | 10 | 611 | 4 | 597 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY265467 | 368 | 145 | 507 | 0 |
FC882555 | 290 | 145 | 434 | 0 |
HO784016 | 421 | 72 | 491 | 0 |
EL455042 | 314 | 72 | 385 | 0 |
HO784016 | 40 | 11 | 50 | 0.000002 |
Sequence Alignments (This image is cropped. Click for full image.) |
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