y
Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.B02278.1 |
Family | GT35 |
Protein Properties | Length: 845 Molecular Weight: 95637.7 Isoelectric Point: 6.2918 |
Chromosome | Chromosome/Scaffold: 2 Start: 43940623 End: 43949663 |
Description | alpha-glucan phosphorylase 2 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT35 | 117 | 839 | 0 |
ALNKLGHDLEEIVEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQLITKDGQEEIAEDWLEKFSPWEIVRHDVVFPVRFFGHVEVTP NGSRKWVGGEVLQALAYDVPIPGYKTKNTNSLRLWEAKASSQDFNLFQFNDGQYESAGQLHSRAEQICAVLYPGDATESGKLLRLKQQFFLCSASLQDII FRFKERKGGEGSRQWVDFPTKVAVQLNDTHPTLAIPELMRLLMDDEGLGWDEAWDITTRTIAYTNHTVLPEALEKWSQAVMRKLLPRHMEIIEEIDKRFM EMVHTQRKDLENKLSTLRILDNNPQKPVVRMANLCVVSGHTVNGVAQLHSDILKSELFADYVSIWPSKFQNKTNGITPRRWLRFCSPELSGIITKWLKTD QWVKNLDLLVGLRQFADNVDLQDEWASAKMANKQRLAQYILRVTGISIDPNSLFDIQVKRIHEYKRQLMNILGVIYRYKKLKEMSPEERKKTISRTVMIG GKAFATYTNAKRIVKLVTDVGNVVNSDPEVNDYLKVIFVPNYNVSVAEILIPGSELSQHISTAGMEASGTSNMKFALNGCLIIGTLDGANVEIREEIGEQ NFFLFGATADEVPRLRKDRENGLFKPDPCFEEAKQFIRSGALGSYDYNPLLDSLEGNSGYGRGDYFLVGHDFPSYMEAQARVDDAYKDRRGWLRMSILST AGSGKFSSDRTIAQYAKEIWNVE |
Full Sequence |
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Protein Sequence Length: 845 Download |
MAATAETNGM TAYGVSAKVP ASACPLADEP AEIASNINYH AKYSPHFSPF KFEPEQAYYA 60 TAESVRDRLI QQWNETYFHY HKTDPKQIYY LSMEYLQGRA LTNAIGNLDI QDAYGDALNK 120 LGHDLEEIVE QEKDAALGNG GLGRLASCFL DSMATLNLPA WGYGLRYRYG LFKQLITKDG 180 QEEIAEDWLE KFSPWEIVRH DVVFPVRFFG HVEVTPNGSR KWVGGEVLQA LAYDVPIPGY 240 KTKNTNSLRL WEAKASSQDF NLFQFNDGQY ESAGQLHSRA EQICAVLYPG DATESGKLLR 300 LKQQFFLCSA SLQDIIFRFK ERKGGEGSRQ WVDFPTKVAV QLNDTHPTLA IPELMRLLMD 360 DEGLGWDEAW DITTRTIAYT NHTVLPEALE KWSQAVMRKL LPRHMEIIEE IDKRFMEMVH 420 TQRKDLENKL STLRILDNNP QKPVVRMANL CVVSGHTVNG VAQLHSDILK SELFADYVSI 480 WPSKFQNKTN GITPRRWLRF CSPELSGIIT KWLKTDQWVK NLDLLVGLRQ FADNVDLQDE 540 WASAKMANKQ RLAQYILRVT GISIDPNSLF DIQVKRIHEY KRQLMNILGV IYRYKKLKEM 600 SPEERKKTIS RTVMIGGKAF ATYTNAKRIV KLVTDVGNVV NSDPEVNDYL KVIFVPNYNV 660 SVAEILIPGS ELSQHISTAG MEASGTSNMK FALNGCLIIG TLDGANVEIR EEIGEQNFFL 720 FGATADEVPR LRKDRENGLF KPDPCFEEAK QFIRSGALGS YDYNPLLDSL EGNSGYGRGD 780 YFLVGHDFPS YMEAQARVDD AYKDRRGWLR MSILSTAGSG KFSSDRTIAQ YAKEIWNVEG 840 CCVP* 900 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd04300 | GT1_Glycogen_Phosphorylase | 0 | 34 | 838 | 814 | + This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. | ||
TIGR02093 | P_ylase | 0 | 37 | 838 | 810 | + glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
pfam00343 | Phosphorylase | 0 | 117 | 839 | 728 | + Carbohydrate phosphorylase. The members of this family catalyze the formation of glucose 1-phosphate from one of the following polyglucoses; glycogen, starch, glucan or maltodextrin. | ||
PRK14985 | PRK14985 | 0 | 81 | 836 | 762 | + maltodextrin phosphorylase; Provisional | ||
COG0058 | GlgP | 0 | 30 | 839 | 815 | + Glucan phosphorylase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004645 | phosphorylase activity |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAG31926.1 | 0 | 3 | 844 | 2 | 843 | alpha-1,4-glucan phosphorylase H isozyme [Cucurbita maxima] |
Swiss-Prot | P32811 | 0 | 1 | 844 | 1 | 838 | PHSH_SOLTU RecName: Full=Alpha-glucan phosphorylase, H isozyme; AltName: Full=Starch phosphorylase H |
RefSeq | XP_002280732.1 | 0 | 1 | 844 | 1 | 843 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002313399.1 | 0 | 2 | 844 | 10 | 853 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002520435.1 | 0 | 1 | 844 | 1 | 849 | glycogen phosphorylase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1z8d_A | 0 | 31 | 839 | 26 | 829 | A Chain A, Crystal Structure Of Human Muscle Glycogen Phosphorylase A With Amp And Glucose |
PDB | 4el5_A | 0 | 31 | 839 | 14 | 817 | A Chain A, Crystal Structure Of Human Muscle Glycogen Phosphorylase A With Amp And Glucose |
PDB | 4el0_A | 0 | 31 | 839 | 14 | 817 | A Chain A, Crystal Structure Of Human Muscle Glycogen Phosphorylase A With Amp And Glucose |
PDB | 4eky_A | 0 | 31 | 839 | 14 | 817 | A Chain A, Crystal Structure Of Human Muscle Glycogen Phosphorylase A With Amp And Glucose |
PDB | 4eke_A | 0 | 31 | 839 | 14 | 817 | A Chain A, Crystal Structure Of Human Muscle Glycogen Phosphorylase A With Amp And Glucose |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO782200 | 412 | 173 | 584 | 0 |
HO418036 | 539 | 243 | 760 | 0 |
HO586252 | 552 | 291 | 841 | 0 |
HO613954 | 499 | 396 | 845 | 0 |
EL450777 | 329 | 357 | 685 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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