Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.B02367.2 |
Family | CBM43 |
Protein Properties | Length: 461 Molecular Weight: 49453.2 Isoelectric Point: 7.7944 |
Chromosome | Chromosome/Scaffold: 2 Start: 44658854 End: 44661842 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 375 | 455 | 5.8e-31 |
WCVPRSDASDQALQANIDYVCSAQVDCKPIQTGGACFDPNTVRSHAAYAMNAYYQSMGQHDYDCDFDKTGVVTAVDPSTSS | |||
GH17 | 28 | 340 | 0 |
IGVNYGTVADNLPPPSQVATFLKTKTAIDRVKLFDANPDILRAFAGTGIAVTVTVGNGDIISLSKLPAAQAWVSANILPFHPKTLINRIAVGNEILATSD KNLIARLLPAMKALHSALQLVNVTNVQVTTPHSLGILSSSEPPSTGRFRRGYDRAIFAPILDFHRQTKSAFMVNPYPFFGFTAKTLNYALFKPNAGIFDA VTGKNYTNMFDAQMDAVYSAMKKVGYEDVEIVVGETGWPSVGDANQPDVNMANAVSYNGNLVRHANAGKGTPLMPNRKFETYVFALFNEDLKPSTSERNY GLFKPDLTPVYDV |
Full Sequence |
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Protein Sequence Length: 461 Download |
MANLFPLATA VFFLSVACPH LSRAAYTIGV NYGTVADNLP PPSQVATFLK TKTAIDRVKL 60 FDANPDILRA FAGTGIAVTV TVGNGDIISL SKLPAAQAWV SANILPFHPK TLINRIAVGN 120 EILATSDKNL IARLLPAMKA LHSALQLVNV TNVQVTTPHS LGILSSSEPP STGRFRRGYD 180 RAIFAPILDF HRQTKSAFMV NPYPFFGFTA KTLNYALFKP NAGIFDAVTG KNYTNMFDAQ 240 MDAVYSAMKK VGYEDVEIVV GETGWPSVGD ANQPDVNMAN AVSYNGNLVR HANAGKGTPL 300 MPNRKFETYV FALFNEDLKP STSERNYGLF KPDLTPVYDV GILRNEPAGG PTPASPSPTA 360 QPSPTAPPTS SGKKWCVPRS DASDQALQAN IDYVCSAQVD CKPIQTGGAC FDPNTVRSHA 420 AYAMNAYYQS MGQHDYDCDF DKTGVVTAVD PSTSSSIPCF * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 8.0e-22 | 374 | 445 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 1.0e-36 | 374 | 455 | 82 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 5.0e-83 | 28 | 340 | 320 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002283647.1 | 0 | 21 | 459 | 21 | 443 | PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
RefSeq | XP_002298356.1 | 0 | 22 | 455 | 21 | 450 | glycoside hydrolase [Populus trichocarpa] |
RefSeq | XP_002312098.1 | 0 | 26 | 451 | 28 | 446 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002530862.1 | 0 | 22 | 454 | 22 | 441 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
RefSeq | XP_002532848.1 | 0 | 24 | 452 | 21 | 438 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 28 | 340 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 28 | 340 | 2 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 28 | 340 | 2 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 0 | 28 | 340 | 2 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_A | 0 | 28 | 340 | 2 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |