| Basic Information | |
|---|---|
| Species | Eucalyptus grandis |
| Cazyme ID | Eucgr.B02675.1 |
| Family | CE11 |
| Protein Properties | Length: 325 Molecular Weight: 35133.1 Isoelectric Point: 7.1623 |
| Chromosome | Chromosome/Scaffold: 2 Start: 49329704 End: 49336393 |
| Description | UDP-3-O-acyl N-acetylglycosamine deacetylase family protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CE11 | 39 | 323 | 0 |
| QQTLAGSIEKTGVGLHSGKVSTVRMRPHLAGGGRCFELQSRFVPASIDHVEESPLCTTLSKDGYRVRTVEHLLSALEATGVDNCRIEVVGLDAGDRDVEV PILDGSAGEWVEAIEGVGLKVAKDACGNSLEKMAPYLDEPVHVWRNDSFVVAFPSSQVHISCGINFPHVPSIGCQWFSASIEYDSFYKREIAPSRTFCVH EEVEKMRSSGLIKGGSLENALVCSVDKGWLNPPLRFNEEPCRHKALDLIGDLSLFARCGSQGLPVGHIVAYKSGHALHAGFLRCL | |||
| Full Sequence |
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| Protein Sequence Length: 325 Download |
| MAPSHFSPLS ARAALSSSAF HALFKSSSRF SWKSTGKLQQ TLAGSIEKTG VGLHSGKVST 60 VRMRPHLAGG GRCFELQSRF VPASIDHVEE SPLCTTLSKD GYRVRTVEHL LSALEATGVD 120 NCRIEVVGLD AGDRDVEVPI LDGSAGEWVE AIEGVGLKVA KDACGNSLEK MAPYLDEPVH 180 VWRNDSFVVA FPSSQVHISC GINFPHVPSI GCQWFSASIE YDSFYKREIA PSRTFCVHEE 240 VEKMRSSGLI KGGSLENALV CSVDKGWLNP PLRFNEEPCR HKALDLIGDL SLFARCGSQG 300 LPVGHIVAYK SGHALHAGFL RCLL* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK13188 | PRK13188 | 1.0e-68 | 39 | 323 | 317 | + bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; Reviewed | ||
| TIGR00325 | lpxC | 5.0e-76 | 39 | 324 | 291 | + UDP-3-0-acyl N-acetylglucosamine deacetylase. UDP-3-O-(R-3-hydroxymyristoyl)-GlcNAc deacetylase from E. coli , LpxC, was previously designated EnvA. This enzyme is involved in lipid-A precursor biosynthesis. It is essential for cell viability [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. | ||
| pfam03331 | LpxC | 9.0e-89 | 39 | 324 | 291 | + UDP-3-O-acyl N-acetylglycosamine deacetylase. The enzymes in this family catalyze the second step in the biosynthetic pathway for lipid A. | ||
| COG0774 | LpxC | 4.0e-89 | 38 | 324 | 296 | + UDP-3-O-acyl-N-acetylglucosamine deacetylase [Cell envelope biogenesis, outer membrane] | ||
| PRK13186 | lpxC | 3.0e-111 | 39 | 324 | 291 | + UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Reviewed | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0008759 | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity |
| GO:0009245 | lipid A biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAD94001.1 | 0 | 26 | 323 | 26 | 323 | hypothetical protein [Arabidopsis thaliana] |
| EMBL | CBI26831.1 | 0 | 17 | 323 | 4 | 309 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_173874.2 | 0 | 26 | 323 | 26 | 323 | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [Arabidopsis thaliana] |
| RefSeq | NP_173884.5 | 0 | 26 | 323 | 69 | 366 | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [Arabidopsis thaliana] |
| RefSeq | XP_002281269.1 | 0 | 17 | 310 | 4 | 296 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 4fw7_D | 4.99997e-41 | 39 | 324 | 7 | 278 | A Chain A, Crystal Structure Of The Nasturtium Seedling Xyloglucanase Isoform Nxg1 |
| PDB | 4fw7_C | 4.99997e-41 | 39 | 324 | 7 | 278 | A Chain A, Crystal Structure Of The Nasturtium Seedling Xyloglucanase Isoform Nxg1 |
| PDB | 4fw7_B | 4.99997e-41 | 39 | 324 | 7 | 278 | A Chain A, Crystal Structure Of The Nasturtium Seedling Xyloglucanase Isoform Nxg1 |
| PDB | 4fw7_A | 4.99997e-41 | 39 | 324 | 7 | 278 | A Chain A, Crystal Structure Of The Nasturtium Seedling Xyloglucanase Isoform Nxg1 |
| PDB | 4fw6_D | 4.99997e-41 | 39 | 324 | 7 | 278 | A Chain A, Crystal Structure Of The Nasturtium Seedling Xyloglucanase Isoform Nxg1 |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| GE608060 | 264 | 31 | 294 | 0 |
| CK277774 | 270 | 30 | 299 | 0 |
| EL383503 | 273 | 31 | 302 | 0 |
| GT006630 | 266 | 35 | 299 | 0 |
| CK277774 | 24 | 298 | 321 | 0.58 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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