| Basic Information | |
|---|---|
| Species | Eucalyptus grandis |
| Cazyme ID | Eucgr.C00397.1 |
| Family | GH18 |
| Protein Properties | Length: 856 Molecular Weight: 95855.2 Isoelectric Point: 6.8853 |
| Chromosome | Chromosome/Scaffold: 3 Start: 7435543 End: 7442742 |
| Description | cysteine-rich RLK (RECEPTOR-like protein kinase) 34 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH18 | 52 | 165 | 4.8e-21 |
| LLAEIASCPSSRKPPLLLTAVVYFASDFFLDAAYRTYPVAAIRKNLDWINAMCYDYHGAWDPSATGAQTAFFDPKSNLSSIHGLKSWLQARLPRKQVVMG LPLYRRSWELKDPN | |||
| GH18 | 210 | 504 | 7.69999e-41 |
| AGSEIPVSDIDSSLFSHLICAFASIDSSAHPFSFNSSFEQIFSTFTSTVKRKNPSITTLLSVWAGGEDPSAFASMLGESSSRRSFIESTIEKTRLYAFSG IDLFGVWLGRSINITNLSVLLGEWRDGVDAESRKSGKPRLLLAMGVYCQSIVDSLSFPLDSIQRYLDWVHLIAYDYHLPTREKGFPARKLVLGLPYHGYA WQLEDSSGDAIGHPAVGPAETADGAFAYKAIKSFIQDFGYGASSVYNGTYVVNFYSKGLVWINFDDVEAIRAKVTYAKEKGLLGYSVFQINSDQN | |||
| Full Sequence |
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| Protein Sequence Length: 856 Download |
| MLSSPQATSP SSSSSQSQRQ WLSNFMSALR FASPPVKTLL SIGGSGDIPA ALLAEIASCP 60 SSRKPPLLLT AVVYFASDFF LDAAYRTYPV AAIRKNLDWI NAMCYDYHGA WDPSATGAQT 120 AFFDPKSNLS SIHGLKSWLQ ARLPRKQVVM GLPLYRRSWE LKDPNVTEIS APALSFMAGK 180 GELASFLIFF LCLYPSLEEQ TRVKSGYFYA GSEIPVSDID SSLFSHLICA FASIDSSAHP 240 FSFNSSFEQI FSTFTSTVKR KNPSITTLLS VWAGGEDPSA FASMLGESSS RRSFIESTIE 300 KTRLYAFSGI DLFGVWLGRS INITNLSVLL GEWRDGVDAE SRKSGKPRLL LAMGVYCQSI 360 VDSLSFPLDS IQRYLDWVHL IAYDYHLPTR EKGFPARKLV LGLPYHGYAW QLEDSSGDAI 420 GHPAVGPAET ADGAFAYKAI KSFIQDFGYG ASSVYNGTYV VNFYSKGLVW INFDDVEAIR 480 AKVTYAKEKG LLGYSVFQIN SDQNWVLSRT GENLESSAPK LQTFGYATLR AATDNFSSEN 540 KIREGGFGPV YKGKLRKGRE IAIKRLSKTS NQGPEEFQNE VMLAVILQHV NLVRLLGFCT 600 DRKEKMLVYE FMPNKSLDFY LFDPIKKYSL DWVKRVHIIE GITQRFLYLY EYSNFTIIHR 660 DLKASNVLLD DEMNPKISDF GMARIFKKDD AEANTNRIVG TYGYIPPEYV RKGIYSMKYD 720 VYSFGVLLLQ ISGKRTSCYY GLDENLNLLD YAYEQWKDDK CMEFVDPSLD DSSSSCKLLR 780 CIQVALLCVQ EKAGDRPSML EVSSMLKNEF SAVNFPKKSA FSIKKDEDED KDDKCLLQEA 840 MPSVNDASIS ELFPR* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| smart00636 | Glyco_18 | 4.0e-21 | 61 | 173 | 116 | + Glyco_18 domain. | ||
| cd02879 | GH18_plant_chitinase_class_V | 2.0e-39 | 24 | 166 | 196 | + The class V plant chitinases have a glycosyl hydrolase family 18 (GH18) domain, but lack the chitin-binding domain present in other GH18 enzymes. The GH18 domain of the class V chitinases has endochitinase activity in some cases and no catalytic activity in others. Included in this family is a lectin found in black locust (Robinia pseudoacacia) bark, which binds chitin but lacks chitinase activity. Also included is a chitinase-related receptor-like kinase (CHRK1) from tobacco (Nicotiana tabacum), with an N-terminal GH18 domain and a C-terminal kinase domain, which is thought to be part of a plant signaling pathway. The GH18 domain of CHRK1 is expressed extracellularly where it binds chitin but lacks chitinase activity. | ||
| pfam00704 | Glyco_hydro_18 | 4.0e-46 | 206 | 502 | 330 | + Glycosyl hydrolases family 18. | ||
| smart00636 | Glyco_18 | 7.0e-55 | 203 | 502 | 343 | + Glyco_18 domain. | ||
| cd02879 | GH18_plant_chitinase_class_V | 5.0e-91 | 200 | 508 | 341 | + The class V plant chitinases have a glycosyl hydrolase family 18 (GH18) domain, but lack the chitin-binding domain present in other GH18 enzymes. The GH18 domain of the class V chitinases has endochitinase activity in some cases and no catalytic activity in others. Included in this family is a lectin found in black locust (Robinia pseudoacacia) bark, which binds chitin but lacks chitinase activity. Also included is a chitinase-related receptor-like kinase (CHRK1) from tobacco (Nicotiana tabacum), with an N-terminal GH18 domain and a C-terminal kinase domain, which is thought to be part of a plant signaling pathway. The GH18 domain of CHRK1 is expressed extracellularly where it binds chitin but lacks chitinase activity. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0004672 | protein kinase activity |
| GO:0005524 | ATP binding |
| GO:0005975 | carbohydrate metabolic process |
| GO:0006468 | protein phosphorylation |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002263709.1 | 0.0000000000003 | 61 | 194 | 177 | 308 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002263709.1 | 0 | 195 | 855 | 18 | 764 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002263792.1 | 0.0000001 | 62 | 173 | 163 | 273 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002263792.1 | 0 | 187 | 855 | 8 | 753 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002270006.1 | 0 | 195 | 855 | 18 | 765 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3aqu_D | 0 | 200 | 509 | 2 | 337 | A Chain A, Crystal Structure Of A Class V Chitinase From Arabidopsis Thaliana |
| PDB | 3aqu_D | 2e-18 | 54 | 188 | 138 | 275 | A Chain A, Crystal Structure Of A Class V Chitinase From Arabidopsis Thaliana |
| PDB | 3aqu_C | 0 | 200 | 509 | 2 | 337 | A Chain A, Crystal Structure Of A Class V Chitinase From Arabidopsis Thaliana |
| PDB | 3aqu_C | 2e-18 | 54 | 188 | 138 | 275 | A Chain A, Crystal Structure Of A Class V Chitinase From Arabidopsis Thaliana |
| PDB | 3aqu_B | 0 | 200 | 509 | 2 | 337 | A Chain A, Crystal Structure Of A Class V Chitinase From Arabidopsis Thaliana |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| GO916691 | 262 | 558 | 818 | 0 |
| EC924914 | 243 | 581 | 822 | 0 |
| GW907829 | 226 | 512 | 736 | 0 |
| CX667178 | 262 | 596 | 856 | 0 |
| GW907829 | 29 | 737 | 765 | 0.14 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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