Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.C00898.1 |
Family | GH35 |
Protein Properties | Length: 875 Molecular Weight: 96526.5 Isoelectric Point: 6.664 |
Chromosome | Chromosome/Scaffold: 3 Start: 14293186 End: 14299345 |
Description | beta galactosidase 1 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 51 | 354 | 0 |
LIVNGKRRILISGSIHYPRSTPGMWPDLIQKAKDGGLDVIQTYVFWNGHEPSPGKYYFEDRYDLVRFIKLVQQAGLYVHLRIGPYVCAEWNFGGFPVWLK FVPGIVFRTDNEPFKAAMQRFTEKIVNMMKAENLFESQGGPIILSQVENEFGPVEWEIGAPGKAYSKWAADMAVGLGTGVPWVMCKQEDAPDPVIDTCNG YYCENFKPNRDYKPKMWTEAWTGWYTEFGGAIPHRPVEDLAYSVARFIQNGGSFVNYYMYHGGTNFGRTSGGPFIATSYDYDAPIDEFGLPREKKWRHLK DLHE |
Full Sequence |
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Protein Sequence Length: 875 Download |
MGSGPKVHVQ TLRGAKSVMA VMLLLLLSWD SCSSSSSSSV AASVTYDHRA LIVNGKRRIL 60 ISGSIHYPRS TPGMWPDLIQ KAKDGGLDVI QTYVFWNGHE PSPGKYYFED RYDLVRFIKL 120 VQQAGLYVHL RIGPYVCAEW NFGGFPVWLK FVPGIVFRTD NEPFKAAMQR FTEKIVNMMK 180 AENLFESQGG PIILSQVENE FGPVEWEIGA PGKAYSKWAA DMAVGLGTGV PWVMCKQEDA 240 PDPVIDTCNG YYCENFKPNR DYKPKMWTEA WTGWYTEFGG AIPHRPVEDL AYSVARFIQN 300 GGSFVNYYMY HGGTNFGRTS GGPFIATSYD YDAPIDEFGL PREKKWRHLK DLHEAIKLCE 360 SALVSSNATV LSLGNKQEAH VFTAESGACA AFLANYDPNY SVKVTFRGRQ YDLPPWSVSI 420 LPDCKTAVFN TARIGAQSSL MKMTPLGKTF SWQSYNEETP SADDSDTTEM EGLLEQINIT 480 RDASDYLWYM TDIVIEPDEA FLKNGQYPVL TVWSAGHALH VFINSQLSGT VYGGLENPKL 540 TFNDNLKLNA GINKLSLLSI AVGLPNVGLH FETWNAGVLG PVTLKGLNSG TWNLTNWKWS 600 YKLGLKGETL GLNTISGSSS VEWMKGSSVV LKLPLTWYKT TFDAPEGDDP LALDMSSMGK 660 GQIWINGQSI GRHWPSYVAG GSCGECNYAG IFVENKCRTN CGQPSQRWYH IPRSWLNPTA 720 NLLVVFEEWG GEPAGISLVK RMTGSVCADI FDGQPALKDR HLVSSGKSNS TYPKVHLTCP 780 RGQEISEIKF ASYGLPQGTC GNYQEGPCHA HRSYDALRKN CIGKQLCSVT VAPEVFGGDP 840 CPNSEKKLSV EAICSQNNAA SVVSEMEECR LHGA* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 0.002 | 66 | 149 | 85 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
COG1874 | LacA | 2.0e-20 | 46 | 346 | 370 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam02140 | Gal_Lectin | 4.0e-21 | 777 | 854 | 81 | + Galactose binding lectin domain. | ||
pfam01301 | Glyco_hydro_35 | 3.0e-163 | 50 | 356 | 322 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 45 | 855 | 811 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABV32546.1 | 0 | 39 | 855 | 23 | 836 | beta-galactosidase protein 1 [Prunus persica] |
GenBank | ABY71826.1 | 0 | 37 | 855 | 21 | 836 | beta-galactosidase [Prunus salicina] |
EMBL | CBI27912.1 | 0 | 12 | 855 | 2 | 833 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002308268.1 | 0 | 34 | 855 | 18 | 838 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002514108.1 | 0 | 39 | 855 | 25 | 840 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 2.00386e-43 | 50 | 339 | 14 | 313 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 2e-40 | 44 | 344 | 11 | 323 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 2e-40 | 44 | 344 | 11 | 323 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |