Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.C01718.1 |
Family | GT47 |
Protein Properties | Length: 335 Molecular Weight: 38543.4 Isoelectric Point: 9.3829 |
Chromosome | Chromosome/Scaffold: 3 Start: 29106260 End: 29107481 |
Description | Exostosin family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 2 | 285 | 0 |
EKRFKVWSYKEGDQPLFHKGPMNDIYSIEGHFIDELEGGRSPFSARRPDEALAFFIPVSIVNIIEFVYRPYTTYARDQLQAIVEDYIGLVSRRHPHWNRT GGADHFMISCHDWAPEVSNGHPQLFKHFIRVLCNANSSEGFRPSRDVSLPEIFLPRGKLLSPWPAPPPDNRSVLAFFAGGAHGPVRKELLRHWKDKDDQV RVHGYLPKTLNYTELMGRSKFCLCPSGYEVASPRVVESVYAGCVPVIISDGYVLPFSDVLDWSKFSVHIPVSRIPDIKRILEGV |
Full Sequence |
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Protein Sequence Length: 335 Download |
MEKRFKVWSY KEGDQPLFHK GPMNDIYSIE GHFIDELEGG RSPFSARRPD EALAFFIPVS 60 IVNIIEFVYR PYTTYARDQL QAIVEDYIGL VSRRHPHWNR TGGADHFMIS CHDWAPEVSN 120 GHPQLFKHFI RVLCNANSSE GFRPSRDVSL PEIFLPRGKL LSPWPAPPPD NRSVLAFFAG 180 GAHGPVRKEL LRHWKDKDDQ VRVHGYLPKT LNYTELMGRS KFCLCPSGYE VASPRVVESV 240 YAGCVPVIIS DGYVLPFSDV LDWSKFSVHI PVSRIPDIKR ILEGVPAEEY RKKQRRVVEV 300 QRHFVVNRPA KPYDMMHMAM HSVWLRRLNL KLPL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00534 | Glycos_transf_1 | 0.003 | 178 | 265 | 101 | + Glycosyl transferases group 1. Mutations in this domain of human PIGA lead to disease (Paroxysmal Nocturnal haemoglobinuria). Members of this family transfer activated sugars to a variety of substrates, including glycogen, Fructose-6-phosphate and lipopolysaccharides. Members of this family transfer UDP, ADP, GDP or CMP linked sugars. The eukaryotic glycogen synthases may be distant members of this family. | ||
pfam03016 | Exostosin | 1.0e-66 | 1 | 285 | 303 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI21065.1 | 0 | 1 | 334 | 66 | 402 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_196674.1 | 0 | 1 | 334 | 1 | 334 | exostosin family protein [Arabidopsis thaliana] |
Swiss-Prot | Q9LFP3 | 0 | 1 | 334 | 145 | 478 | GLYT4_ARATH RecName: Full=Probable glycosyltransferase At5g11130 |
RefSeq | XP_002285239.1 | 0 | 1 | 334 | 1 | 337 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002324873.1 | 0 | 1 | 333 | 1 | 334 | predicted protein [Populus trichocarpa] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FD507587 | 228 | 44 | 271 | 0 |
EC939466 | 238 | 1 | 233 | 0 |
CV880634 | 200 | 86 | 285 | 0 |
GO373511 | 255 | 78 | 332 | 0 |
CO983212 | 231 | 103 | 332 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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