| Basic Information | |
|---|---|
| Species | Eucalyptus grandis |
| Cazyme ID | Eucgr.C02440.3 |
| Family | GH33 |
| Protein Properties | Length: 328 Molecular Weight: 36940.8 Isoelectric Point: 5.2233 |
| Chromosome | Chromosome/Scaffold: 3 Start: 46549705 End: 46558470 |
| Description | BNR/Asp-box repeat family protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH33 | 23 | 316 | 8.1e-26 |
| FPAKSAPFNNCHASTIVEVNEDHFLVAYFGGTEEGAPDVKIWLQRYQHGRWHPPIIIDEQEDVPMWNPVLYKFPSGELLLFYKIGQDFQRWSGFLKRSYN QGVSWSEREQLPPGILGPIKNKPILLDNGDLLCGSSVESWNSWGAWMEITPDAGRTWRKYGPIYLKNESLSVIQPVPFKTARGTLRVLLRSFTGIDRICM SESHDGGMNWGYAEFTELPNPNSGIDGVKLKNGLLIVAYNTISRGILKVAVSLDDGDSWHEALTLEENLEMEFSYPAVIEASDGSVHVTYTYNR | |||
| Full Sequence |
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| Protein Sequence Length: 328 Download |
| MAQSSNLTKD SRVEGPVEQD FTFPAKSAPF NNCHASTIVE VNEDHFLVAY FGGTEEGAPD 60 VKIWLQRYQH GRWHPPIIID EQEDVPMWNP VLYKFPSGEL LLFYKIGQDF QRWSGFLKRS 120 YNQGVSWSER EQLPPGILGP IKNKPILLDN GDLLCGSSVE SWNSWGAWME ITPDAGRTWR 180 KYGPIYLKNE SLSVIQPVPF KTARGTLRVL LRSFTGIDRI CMSESHDGGM NWGYAEFTEL 240 PNPNSGIDGV KLKNGLLIVA YNTISRGILK VAVSLDDGDS WHEALTLEEN LEMEFSYPAV 300 IEASDGSVHV TYTYNRTQIK RVVLHVN* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03404 | Mo-co_dimer | 0.003 | 259 | 289 | 32 | + Mo-co oxidoreductase dimerisation domain. This domain is found in molybdopterin cofactor (Mo-co) oxidoreductases. It is involved in dimer formation, and has an Ig-fold structure. | ||
| COG4692 | COG4692 | 6.0e-29 | 29 | 324 | 353 | + Predicted neuraminidase (sialidase) [Carbohydrate transport and metabolism] | ||
| pfam13088 | BNR_2 | 6.0e-89 | 44 | 310 | 282 | + BNR repeat-like domain. This family of proteins contains BNR-like repeats suggesting these proteins may act as sialidases. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACU18568.1 | 0 | 1 | 325 | 32 | 352 | unknown [Glycine max] |
| RefSeq | NP_851204.1 | 0 | 19 | 324 | 16 | 321 | BNR/Asp-box repeat family protein [Arabidopsis thaliana] |
| RefSeq | XP_002263578.1 | 0 | 2 | 327 | 44 | 369 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002324495.1 | 0 | 7 | 325 | 1 | 319 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002531744.1 | 0 | 7 | 327 | 1 | 321 | conserved hypothetical protein [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2jkb_A | 0.009 | 117 | 239 | 450 | 571 | A Chain A, Crystal Structure Of Streptococcus Pneumoniae Nanb In Complex With 2,7-Anhydro-Neu5ac |
| PDB | 4fq4_A | 0.009 | 117 | 239 | 461 | 582 | A Chain A, Crystal Structure Of Streptococcus Pneumoniae Nanb In Complex With 2,7-Anhydro-Neu5ac |
| PDB | 4fpy_A | 0.009 | 117 | 239 | 461 | 582 | A Chain A, Crystal Structure Of Streptococcus Pneumoniae Nanb In Complex With 2,7-Anhydro-Neu5ac |
| PDB | 4fpo_B | 0.009 | 117 | 239 | 461 | 582 | A Chain A, Crystal Structure Of Streptococcus Pneumoniae Nanb In Complex With 2,7-Anhydro-Neu5ac |
| PDB | 4fpl_A | 0.009 | 117 | 239 | 461 | 582 | A Chain A, Crystal Structure Of Streptococcus Pneumoniae Nanb In Complex With 2,7-Anhydro-Neu5ac |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| EL689016 | 287 | 25 | 311 | 0 |
| DV137355 | 268 | 46 | 313 | 0 |
| EY114510 | 258 | 16 | 273 | 0 |
| DV145816 | 252 | 46 | 297 | 0 |
| FF344386 | 262 | 56 | 317 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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