Basic Information | |
---|---|
Species | Eucalyptus grandis |
Cazyme ID | Eucgr.C02448.1 |
Family | CE8 |
Protein Properties | Length: 206 Molecular Weight: 22594.7 Isoelectric Point: 8.4631 |
Chromosome | Chromosome/Scaffold: 3 Start: 46646713 End: 46647849 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CE8 | 2 | 205 | 0 |
QEKVKIPEDKPYIILKGQAKRTTEIVWDDQSTWDDQSTMTTSCKARLSYLWPITSLLKASVLGIRVIILLTRNTLGPPAVAARVSGDMTVFHRCEFYGLQ DTLWDNQGRQYFKRCTVQGAVDFIFGGGQSIYENCAISVLGGALGPGVTGFITAQGRSNPDDASGFVFNECNVFGSGSALLGRAWRAYARGIFYRSNFTD VVNP |
Full Sequence |
---|
Protein Sequence Length: 206 Download |
MQEKVKIPED KPYIILKGQA KRTTEIVWDD QSTWDDQSTM TTSCKARLSY LWPITSLLKA 60 SVLGIRVIIL LTRNTLGPPA VAARVSGDMT VFHRCEFYGL QDTLWDNQGR QYFKRCTVQG 120 AVDFIFGGGQ SIYENCAISV LGGALGPGVT GFITAQGRSN PDDASGFVFN ECNVFGSGSA 180 LLGRAWRAYA RGIFYRSNFT DVVNP* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02665 | PLN02665 | 8.0e-42 | 3 | 205 | 210 | + pectinesterase family protein | ||
PLN02432 | PLN02432 | 4.0e-43 | 2 | 205 | 209 | + putative pectinesterase | ||
PLN02304 | PLN02304 | 1.0e-46 | 3 | 205 | 206 | + probable pectinesterase | ||
PLN02176 | PLN02176 | 2.0e-51 | 2 | 205 | 205 | + putative pectinesterase | ||
PLN02497 | PLN02497 | 2.0e-85 | 2 | 205 | 212 | + probable pectinesterase |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAB01354.1 | 0 | 2 | 205 | 72 | 265 | pectin methylesterase-like protein [Arabidopsis thaliana] |
RefSeq | NP_189055.1 | 0 | 2 | 205 | 72 | 269 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | NP_197400.1 | 0 | 2 | 205 | 67 | 264 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002323773.1 | 0 | 2 | 205 | 39 | 225 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518106.1 | 0 | 2 | 205 | 86 | 272 | Pectinesterase U1 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 4e-25 | 2 | 205 | 47 | 246 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 1e-21 | 73 | 205 | 100 | 242 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 0.0000000007 | 80 | 187 | 130 | 246 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 0.0000000007 | 80 | 187 | 130 | 246 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 0.0000000007 | 80 | 187 | 130 | 246 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |