y
Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.C02767.1 |
Family | CBM57 |
Protein Properties | Length: 628 Molecular Weight: 67392.4 Isoelectric Point: 4.7571 |
Chromosome | Chromosome/Scaffold: 3 Start: 52895906 End: 52900756 |
Description | Leucine-rich repeat transmembrane protein kinase |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM57 | 405 | 579 | 3e-36 |
SINCGGTEQTSAAGVKYDDDSKTLEAASVYMSSNRQWGISNSGYFIFTSNGPQYIVKTDSQITGTLESELYKTARVSASSLRYYGLGLKNGKYSVELHFA EIKMEDDDSRSWKGLGRRVFDVYIQGERVLQDFDIQKQAGGSNRALVRTFDANVTNTVLDIHFRWAGKGTCCIPS |
Full Sequence |
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Protein Sequence Length: 628 Download |
MGVLALSMLV LCVIQVVAAQ KTTDPNEGAA LKKIIEHWNL GSSLNSTVDP CTQNASWAPD 60 TANPRVSCDC SGNVCHITHL KIYALDISGQ IPSELFELKE LTDLNLAQNV LSGPIPPQFE 120 QLSNMQYLSL GINNLTGQVP PELGNMTKLL SLSFSSNNLS GPLPAELGKL TALEQLYIDS 180 SGVSGPIPQD LANLKSLQKL WASDNLFTGK LPEFLGTLTE LVDLRFEGTS LEGPIPDSFG 240 ALTKLENLII GDLVGDDSSL DFLRNQTSLS VLSLRSCQLS GQIPDIIGTF SKLKYLDLSF 300 NKLEGTIPDS FQGFTKLQFL FLGNNNLTGP LPANIVSQSL TALDVSFNPL SGNLPVNVDM 360 SGYSMNFVGT SINADYLADR KALEMLSCLK AGTECANKAK STSFSINCGG TEQTSAAGVK 420 YDDDSKTLEA ASVYMSSNRQ WGISNSGYFI FTSNGPQYIV KTDSQITGTL ESELYKTARV 480 SASSLRYYGL GLKNGKYSVE LHFAEIKMED DDSRSWKGLG RRVFDVYIQG ERVLQDFDIQ 540 KQAGGSNRAL VRTFDANVTN TVLDIHFRWA GKGTCCIPSQ STYGPLVSAI SASPVSGVDG 600 TSSDDNKKRV GKIVGIAFGC AAGLVIV* 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN00113 | PLN00113 | 5.0e-29 | 80 | 355 | 280 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
PLN00113 | PLN00113 | 1.0e-34 | 72 | 355 | 287 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
PLN00113 | PLN00113 | 2.0e-35 | 42 | 355 | 320 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
PLN00113 | PLN00113 | 1.0e-36 | 82 | 355 | 283 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
pfam11721 | Malectin | 1.0e-59 | 402 | 590 | 192 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. |
Gene Ontology | |
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GO Term | Description |
GO:0005515 | protein binding |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI21051.1 | 0 | 1 | 612 | 1 | 609 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002282711.1 | 0 | 1 | 612 | 157 | 751 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002309634.1 | 0 | 15 | 593 | 15 | 464 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002324865.1 | 0 | 1 | 615 | 1 | 556 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002515504.1 | 0 | 18 | 615 | 263 | 857 | ATP binding protein, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3rj0_A | 4e-25 | 69 | 356 | 218 | 553 | A Chain A, Peanut Peroxidase |
PDB | 3rj0_A | 1e-23 | 72 | 332 | 436 | 718 | A Chain A, Peanut Peroxidase |
PDB | 3rj0_A | 5e-22 | 73 | 355 | 413 | 694 | A Chain A, Peanut Peroxidase |
PDB | 3rj0_A | 0.000000000000003 | 86 | 332 | 474 | 743 | A Chain A, Peanut Peroxidase |
PDB | 3rj0_A | 0.000000000002 | 101 | 355 | 99 | 357 | A Chain A, Peanut Peroxidase |