| Basic Information | |
|---|---|
| Species | Eucalyptus grandis |
| Cazyme ID | Eucgr.C03182.1 |
| Family | CBM43 |
| Protein Properties | Length: 443 Molecular Weight: 48343 Isoelectric Point: 7.1332 |
| Chromosome | Chromosome/Scaffold: 3 Start: 60320550 End: 60321994 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM43 | 321 | 402 | 7.6e-24 |
| WCVMAPQASLSDPNLPGATSYACSYADCTSLGYGSSCGNLDAKSNASYAFNMYYQTMDQKQGSCSFNNLTVLTVIDPSQGGC | |||
| GH17 | 1 | 301 | 0 |
| VRLLKDNGFDKVKLFEADPGPLKALGHSGIQVMVGIPNELLIPLSSSVQAAVNWVSQNVSTFISKYGVDIRYVAVGNEPFLKAYKDMYVKTTFPALQNIQ AALIKAGLGQQVKATVPLNGDVYQTDSGLPSGGDFRSDIRTLMISIVKFLRNNGAPLTVNIYPFLSLDADPDFPFEYAFFDGKAKPVVDGSITYTNVLDA NFDTLMAALEKNGFGSTPVIIGEVGWPSDGTPNANNQNARRFNQGLLNRINSGKFSPKHPSMPDIYLFAFIDEDMKSVDPGNFERHWGIFYYDGSIKYPL D | |||
| Full Sequence |
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| Protein Sequence Length: 443 Download |
| VRLLKDNGFD KVKLFEADPG PLKALGHSGI QVMVGIPNEL LIPLSSSVQA AVNWVSQNVS 60 TFISKYGVDI RYVAVGNEPF LKAYKDMYVK TTFPALQNIQ AALIKAGLGQ QVKATVPLNG 120 DVYQTDSGLP SGGDFRSDIR TLMISIVKFL RNNGAPLTVN IYPFLSLDAD PDFPFEYAFF 180 DGKAKPVVDG SITYTNVLDA NFDTLMAALE KNGFGSTPVI IGEVGWPSDG TPNANNQNAR 240 RFNQGLLNRI NSGKFSPKHP SMPDIYLFAF IDEDMKSVDP GNFERHWGIF YYDGSIKYPL 300 DMGNGKNLVA AKGVKYLSRH WCVMAPQASL SDPNLPGATS YACSYADCTS LGYGSSCGNL 360 DAKSNASYAF NMYYQTMDQK QGSCSFNNLT VLTVIDPSQG GCRFEIMIDN KTHEKTPSPS 420 TSSRGKHVTS LLVLLHVIAL IFC |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 0.0001 | 215 | 293 | 79 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 1.0e-15 | 321 | 389 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 3.0e-28 | 321 | 404 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 3.0e-64 | 1 | 301 | 303 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI27737.1 | 0 | 1 | 442 | 43 | 483 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_001147933.1 | 0 | 1 | 421 | 48 | 473 | glucan endo-1,3-beta-glucosidase 5 [Zea mays] |
| RefSeq | XP_002277217.1 | 0 | 1 | 442 | 35 | 475 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002309443.1 | 0 | 1 | 406 | 20 | 425 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002516181.1 | 0 | 1 | 438 | 60 | 498 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ghr_A | 0 | 1 | 301 | 19 | 305 | A Chain A, Glu381ser Mutant Of Maize Cytokinin OxidaseDEHYDROGENASE COMPLEXED With N6-Isopentenyladenosine |
| PDB | 1aq0_B | 0 | 1 | 301 | 19 | 305 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 1aq0_A | 0 | 1 | 301 | 19 | 305 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 3f55_D | 4.06377e-44 | 1 | 302 | 20 | 315 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 3f55_C | 4.06377e-44 | 1 | 302 | 20 | 315 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO797198 | 409 | 1 | 408 | 0 |
| DT763058 | 284 | 75 | 354 | 0 |
| AM721378 | 299 | 71 | 368 | 0 |
| FY453511 | 287 | 16 | 302 | 0 |
| DT549821 | 232 | 1 | 232 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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