Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.C03710.1 |
Family | CBM43 |
Protein Properties | Length: 501 Molecular Weight: 54400.6 Isoelectric Point: 5.4146 |
Chromosome | Chromosome/Scaffold: 3 Start: 70592546 End: 70596671 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 366 | 448 | 9e-31 |
WCIASANASEIELQKGLDWACGSGNVDCSAIQPSQPCYEPDTLVSHASFAFNGYYQQNGATDVACSFGGAGLKVDKNPSYDKC | |||
GH17 | 26 | 344 | 0 |
IGICYGRNADDLPTPDKVAQLVKLHNIKYLRIYDSNIQVLKAFANTGVQLIIGISNSDLLPFSQFQSNADTWLKNSILPYYPATKITYITVGAEATEISS NVTALVVPAMQNIFTALRKVGLHKRIKVSTTHSLGVLSRSFPPSAGAFNSNYASFLKPLLIFLAENQSPFMIDIYPYYAYRDSPNNVSLDYALFESSSDV IDPNTGLLYTNMFDAQIDALYFALMALNFRTIKIMVTETGWPSKGSAKETAATPDNAQTYNTNLIRHVINDTGTPAKPGEALDVYIFSLFNENRKPGLDS ERNWGLFYPDETSVYNLDF |
Full Sequence |
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Protein Sequence Length: 501 Download |
MGRGFRLIFA TSLLLMLLDL CRGSTIGICY GRNADDLPTP DKVAQLVKLH NIKYLRIYDS 60 NIQVLKAFAN TGVQLIIGIS NSDLLPFSQF QSNADTWLKN SILPYYPATK ITYITVGAEA 120 TEISSNVTAL VVPAMQNIFT ALRKVGLHKR IKVSTTHSLG VLSRSFPPSA GAFNSNYASF 180 LKPLLIFLAE NQSPFMIDIY PYYAYRDSPN NVSLDYALFE SSSDVIDPNT GLLYTNMFDA 240 QIDALYFALM ALNFRTIKIM VTETGWPSKG SAKETAATPD NAQTYNTNLI RHVINDTGTP 300 AKPGEALDVY IFSLFNENRK PGLDSERNWG LFYPDETSVY NLDFTGRGSV DVITGANITS 360 SNGTTWCIAS ANASEIELQK GLDWACGSGN VDCSAIQPSQ PCYEPDTLVS HASFAFNGYY 420 QQNGATDVAC SFGGAGLKVD KNPSYDKCLY MTAGSNKTAT SNATAISSTS SSQAGEVHIL 480 ALSSTIMTFF LSFILIIGNI * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 4.0e-7 | 255 | 335 | 84 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 5.0e-20 | 365 | 436 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 2.0e-37 | 365 | 450 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 3.0e-114 | 26 | 344 | 319 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABD91576.1 | 0 | 1 | 464 | 1 | 468 | beta-1,3-glucanase [Medicago sativa] |
GenBank | ABD91577.1 | 0 | 1 | 464 | 1 | 468 | beta-1,3-glucanase [Medicago sativa] |
RefSeq | XP_002283473.1 | 0 | 1 | 462 | 1 | 461 | PREDICTED: similar to beta-1,3-glucanase [Vitis vinifera] |
RefSeq | XP_002330523.1 | 0 | 21 | 454 | 22 | 455 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002514201.1 | 0 | 1 | 467 | 1 | 468 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 26 | 344 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 26 | 345 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 26 | 345 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 0 | 26 | 345 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_A | 0 | 26 | 345 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |